Gene : Glyma.05G035600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12297 - HYPOXIA-INDUCBILE GENE 1 HIG1 -RELATED Genomic Order:  356
Name:  ? Glyma.05G035600 Secondary Identifier:  ? PAC:30525561
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G035600 0.5kb upstream 0.5kb upstream 3577 true Chr05: 3129127-3132703 Glycine max
Glyma.05G035600 0.5kb upstream 0.5kb upstream 500 false Chr05: 3129127-3129626 Glycine max
Glyma.05G035600 0.5kb downstream 0.5kb downstream 3577 true Chr05: 3129627-3133203 Glycine max
Glyma.05G035600 0.5kb downstream 0.5kb downstream 500 false Chr05: 3132704-3133203 Glycine max
Glyma.05G035600 1.0kb upstream 1.0kb upstream 4077 true Chr05: 3128627-3132703 Glycine max
Glyma.05G035600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3128627-3129626 Glycine max
Glyma.05G035600 1.0kb downstream 1.0kb downstream 4077 true Chr05: 3129627-3133703 Glycine max
Glyma.05G035600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3132704-3133703 Glycine max
Glyma.05G035600 2.0kb upstream 2.0kb upstream 5077 true Chr05: 3127627-3132703 Glycine max
Glyma.05G035600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3127627-3129626 Glycine max
Glyma.05G035600 2.0kb downstream 2.0kb downstream 5077 true Chr05: 3129627-3134703 Glycine max
Glyma.05G035600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3132704-3134703 Glycine max
Glyma.05G035600 5.0kb upstream 5.0kb upstream 8077 true Chr05: 3124627-3132703 Glycine max
Glyma.05G035600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3124627-3129626 Glycine max
Glyma.05G035600 5.0kb downstream 5.0kb downstream 8077 true Chr05: 3129627-3137703 Glycine max
Glyma.05G035600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3132704-3137703 Glycine max
Glyma.05G035600 10.0kb upstream 10.0kb upstream 13077 true Chr05: 3119627-3132703 Glycine max
Glyma.05G035600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3119627-3129626 Glycine max
Glyma.05G035600 10.0kb downstream 10.0kb downstream 13077 true Chr05: 3129627-3142703 Glycine max
Glyma.05G035600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3132704-3142703 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306805 5265 Fabidae View MSA
124069964 5270 Rosid View MSA
123750302 5271 Pentapetalae View MSA
122790917 5272 Eudicot View MSA
122045148 5273 Angiosperm View MSA
121347874 5274 Embryophyte View MSA
123423754 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.9528 0.0 141.64 High  
cufflinks 52.5897 0.0 140.58 High  
cufflinks 70.5169 0.0 188.217 High  
cufflinks 33.5354 0.0 91.3293 High Low
cufflinks 71.1031 0.0 189.806 High  
cufflinks 117.148 0.0 318.731 High High
cufflinks 58.0366 0.0 154.898 High  
cufflinks 62.294 0.0 166.193 High  
cufflinks 55.9498 0.0 149.349 High  
cufflinks 14.912     High High
cufflinks 12.99     High  
cufflinks 8.386     High Low
cufflinks 12.658     High  
cufflinks 13.7     High High
cufflinks 10.556     High  
cufflinks 10.691     High  
cufflinks 9.166     High Low
cufflinks 10.925     High  
cufflinks 7.886     High Low
cufflinks 11.876     High  
cufflinks 11.538     High  
cufflinks 10.734     High  
cufflinks 9.28     High Low
cufflinks 11.643     High  
cufflinks 12.824     High  
cufflinks 11.021     High  

0 Strain