Gene : Glyma.05G035800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Genomic Order:  358
Name:  ? Glyma.05G035800 Secondary Identifier:  ? PAC:30526327
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G035800 0.5kb upstream 0.5kb upstream 2626 true Chr05: 3150803-3153428 Glycine max
Glyma.05G035800 0.5kb upstream 0.5kb upstream 500 false Chr05: 3150803-3151302 Glycine max
Glyma.05G035800 0.5kb downstream 0.5kb downstream 2626 true Chr05: 3151303-3153928 Glycine max
Glyma.05G035800 0.5kb downstream 0.5kb downstream 500 false Chr05: 3153429-3153928 Glycine max
Glyma.05G035800 1.0kb upstream 1.0kb upstream 3126 true Chr05: 3150303-3153428 Glycine max
Glyma.05G035800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3150303-3151302 Glycine max
Glyma.05G035800 1.0kb downstream 1.0kb downstream 3126 true Chr05: 3151303-3154428 Glycine max
Glyma.05G035800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3153429-3154428 Glycine max
Glyma.05G035800 2.0kb upstream 2.0kb upstream 4126 true Chr05: 3149303-3153428 Glycine max
Glyma.05G035800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3149303-3151302 Glycine max
Glyma.05G035800 2.0kb downstream 2.0kb downstream 4126 true Chr05: 3151303-3155428 Glycine max
Glyma.05G035800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3153429-3155428 Glycine max
Glyma.05G035800 5.0kb upstream 5.0kb upstream 7126 true Chr05: 3146303-3153428 Glycine max
Glyma.05G035800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3146303-3151302 Glycine max
Glyma.05G035800 5.0kb downstream 5.0kb downstream 7126 true Chr05: 3151303-3158428 Glycine max
Glyma.05G035800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3153429-3158428 Glycine max
Glyma.05G035800 10.0kb upstream 10.0kb upstream 12126 true Chr05: 3141303-3153428 Glycine max
Glyma.05G035800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3141303-3151302 Glycine max
Glyma.05G035800 10.0kb downstream 10.0kb downstream 12126 true Chr05: 3151303-3163428 Glycine max
Glyma.05G035800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3153429-3163428 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041020 5273 Angiosperm View MSA
122316128 5265 Fabidae View MSA
124071790 5270 Rosid View MSA
123752396 5271 Pentapetalae View MSA
122790664 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.135169 0.0 0.52761 Low  
cufflinks 1.31417 0.0 4.49221    
cufflinks 0.117297 0.0 0.459726 Low  
cufflinks 1.06404 0.0 3.71091    
cufflinks 0.345655 0.0 1.29546    
cufflinks 0.0209025 0.0 0.0895783 Low Low
cufflinks 0.138229 0.0 0.539117 Low  
cufflinks 4.64797 0.0 13.4103   High
cufflinks 0.611063 0.0 2.22038    
cufflinks 0.981       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.312        
cufflinks 0.187        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.475        
cufflinks 0.07       Low
cufflinks 0.264        
cufflinks 1.16       High
cufflinks 0.336        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.463        
cufflinks 0.538        
cufflinks 0.036     Low Low
cufflinks 0.368        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain