Gene : Glyma.05G037500 G. max Wm82.a2.v1
Defline:  (1 of 5) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Genomic Order:  375
Name:  ? Glyma.05G037500 Secondary Identifier:  ? PAC:30523925
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7560 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G037500 0.5kb upstream 0.5kb upstream 5724 true Chr05: 3317755-3323478 Glycine max
Glyma.05G037500 0.5kb upstream 0.5kb upstream 500 false Chr05: 3317755-3318254 Glycine max
Glyma.05G037500 0.5kb downstream 0.5kb downstream 5724 true Chr05: 3318255-3323978 Glycine max
Glyma.05G037500 0.5kb downstream 0.5kb downstream 500 false Chr05: 3323479-3323978 Glycine max
Glyma.05G037500 1.0kb upstream 1.0kb upstream 6224 true Chr05: 3317255-3323478 Glycine max
Glyma.05G037500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3317255-3318254 Glycine max
Glyma.05G037500 1.0kb downstream 1.0kb downstream 6224 true Chr05: 3318255-3324478 Glycine max
Glyma.05G037500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3323479-3324478 Glycine max
Glyma.05G037500 2.0kb upstream 2.0kb upstream 7224 true Chr05: 3316255-3323478 Glycine max
Glyma.05G037500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3316255-3318254 Glycine max
Glyma.05G037500 2.0kb downstream 2.0kb downstream 7224 true Chr05: 3318255-3325478 Glycine max
Glyma.05G037500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3323479-3325478 Glycine max
Glyma.05G037500 5.0kb upstream 5.0kb upstream 10224 true Chr05: 3313255-3323478 Glycine max
Glyma.05G037500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3313255-3318254 Glycine max
Glyma.05G037500 5.0kb downstream 5.0kb downstream 10224 true Chr05: 3318255-3328478 Glycine max
Glyma.05G037500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3323479-3328478 Glycine max
Glyma.05G037500 10.0kb upstream 10.0kb upstream 15224 true Chr05: 3308255-3323478 Glycine max
Glyma.05G037500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3308255-3318254 Glycine max
Glyma.05G037500 10.0kb downstream 10.0kb downstream 15224 true Chr05: 3318255-3333478 Glycine max
Glyma.05G037500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3323479-3333478 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041406 5273 Angiosperm View MSA
122304768 5265 Fabidae View MSA
124066605 5270 Rosid View MSA
123736883 5271 Pentapetalae View MSA
122791920 5272 Eudicot View MSA
121344534 5274 Embryophyte View MSA
123424385 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.3724 0.0 130.53 High High
cufflinks 14.2898 0.0 38.1246    
cufflinks 9.43278 0.0 25.3247    
cufflinks 8.72038 0.0 23.5135   Low
cufflinks 53.1098 0.0 155.909 High High
cufflinks 50.2245 0.0 146.722 High High
cufflinks 14.5579 0.0 38.8397    
cufflinks 9.38727 0.0 25.2355    
cufflinks 21.512 0.0 57.9794 High  
cufflinks 5.754       Low
cufflinks 27.216     High  
cufflinks 4.903       Low
cufflinks 25.239     High  
cufflinks 31.792     High  
cufflinks 204.52     High High
cufflinks 10.398     High  
cufflinks 18.71     High  
cufflinks 5.709       Low
cufflinks 7.742     High  
cufflinks 8.235     High  
cufflinks 37.299     High  
cufflinks 8.902     High  
cufflinks 11.496     High  
cufflinks 30.86     High  
cufflinks 10.562     High  
cufflinks 25.814     High  

0 Strain