Gene : Glyma.05G038100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10093 - IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG Genomic Order:  381
Name:  ? Glyma.05G038100 Secondary Identifier:  ? PAC:30526725
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G038100 0.5kb upstream 0.5kb upstream 2619 true Chr05: 3388905-3391523 Glycine max
Glyma.05G038100 0.5kb upstream 0.5kb upstream 500 false Chr05: 3391024-3391523 Glycine max
Glyma.05G038100 0.5kb downstream 0.5kb downstream 2619 true Chr05: 3388405-3391023 Glycine max
Glyma.05G038100 0.5kb downstream 0.5kb downstream 500 false Chr05: 3388405-3388904 Glycine max
Glyma.05G038100 1.0kb upstream 1.0kb upstream 3119 true Chr05: 3388905-3392023 Glycine max
Glyma.05G038100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3391024-3392023 Glycine max
Glyma.05G038100 1.0kb downstream 1.0kb downstream 3119 true Chr05: 3387905-3391023 Glycine max
Glyma.05G038100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3387905-3388904 Glycine max
Glyma.05G038100 2.0kb upstream 2.0kb upstream 4119 true Chr05: 3388905-3393023 Glycine max
Glyma.05G038100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3391024-3393023 Glycine max
Glyma.05G038100 2.0kb downstream 2.0kb downstream 4119 true Chr05: 3386905-3391023 Glycine max
Glyma.05G038100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3386905-3388904 Glycine max
Glyma.05G038100 5.0kb upstream 5.0kb upstream 7119 true Chr05: 3388905-3396023 Glycine max
Glyma.05G038100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3391024-3396023 Glycine max
Glyma.05G038100 5.0kb downstream 5.0kb downstream 7119 true Chr05: 3383905-3391023 Glycine max
Glyma.05G038100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3383905-3388904 Glycine max
Glyma.05G038100 10.0kb upstream 10.0kb upstream 12119 true Chr05: 3388905-3401023 Glycine max
Glyma.05G038100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3391024-3401023 Glycine max
Glyma.05G038100 10.0kb downstream 10.0kb downstream 12119 true Chr05: 3378905-3391023 Glycine max
Glyma.05G038100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3378905-3388904 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026522 5273 Angiosperm View MSA
122314473 5265 Fabidae View MSA
124069204 5270 Rosid View MSA
123746526 5271 Pentapetalae View MSA
122790333 5272 Eudicot View MSA
121348454 5274 Embryophyte View MSA
123428131 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.6268 0.0 105.731 High  
cufflinks 36.3632 0.0 97.0271 High  
cufflinks 39.944 0.0 106.57 High  
cufflinks 48.1918 0.0 128.978 High High
cufflinks 23.9985 0.0 64.5782 High Low
cufflinks 37.675 0.0 100.513 High  
cufflinks 31.5545 0.0 84.3086 High  
cufflinks 35.6543 0.0 95.1339 High  
cufflinks 20.9305 0.0 56.8095 High Low
cufflinks 10.678     High  
cufflinks 1.818       Low
cufflinks 13.158     High  
cufflinks 6.424        
cufflinks 7.637     High  
cufflinks 0.829       Low
cufflinks 10.858     High  
cufflinks 5.741        
cufflinks 14.808     High High
cufflinks 11.864     High  
cufflinks 9.933     High  
cufflinks 2.843       Low
cufflinks 10.928     High  
cufflinks 11.314     High  
cufflinks 2.537       Low
cufflinks 10.337     High  
cufflinks 6.253        

0 Strain