Gene : Glyma.05G031000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22975 - UBIQUITIN SPECIFIC PROTEINASE Genomic Order:  310
Name:  ? Glyma.05G031000 Secondary Identifier:  ? PAC:30523711
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G031000 0.5kb upstream 0.5kb upstream 10165 true Chr05: 2689114-2699278 Glycine max
Glyma.05G031000 0.5kb upstream 0.5kb upstream 500 false Chr05: 2689114-2689613 Glycine max
Glyma.05G031000 0.5kb downstream 0.5kb downstream 10165 true Chr05: 2689614-2699778 Glycine max
Glyma.05G031000 0.5kb downstream 0.5kb downstream 500 false Chr05: 2699279-2699778 Glycine max
Glyma.05G031000 1.0kb upstream 1.0kb upstream 10665 true Chr05: 2688614-2699278 Glycine max
Glyma.05G031000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2688614-2689613 Glycine max
Glyma.05G031000 1.0kb downstream 1.0kb downstream 10665 true Chr05: 2689614-2700278 Glycine max
Glyma.05G031000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2699279-2700278 Glycine max
Glyma.05G031000 2.0kb upstream 2.0kb upstream 11665 true Chr05: 2687614-2699278 Glycine max
Glyma.05G031000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2687614-2689613 Glycine max
Glyma.05G031000 2.0kb downstream 2.0kb downstream 11665 true Chr05: 2689614-2701278 Glycine max
Glyma.05G031000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2699279-2701278 Glycine max
Glyma.05G031000 5.0kb upstream 5.0kb upstream 14665 true Chr05: 2684614-2699278 Glycine max
Glyma.05G031000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2684614-2689613 Glycine max
Glyma.05G031000 5.0kb downstream 5.0kb downstream 14665 true Chr05: 2689614-2704278 Glycine max
Glyma.05G031000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2699279-2704278 Glycine max
Glyma.05G031000 10.0kb upstream 10.0kb upstream 19665 true Chr05: 2679614-2699278 Glycine max
Glyma.05G031000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2679614-2689613 Glycine max
Glyma.05G031000 10.0kb downstream 10.0kb downstream 19665 true Chr05: 2689614-2709278 Glycine max
Glyma.05G031000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2699279-2709278 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304724 5265 Fabidae View MSA
124072872 5270 Rosid View MSA
123749894 5271 Pentapetalae View MSA
122797305 5272 Eudicot View MSA
122047573 5273 Angiosperm View MSA
121346745 5274 Embryophyte View MSA
123380438 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.62937 0.0 19.3544    
cufflinks 3.91553 0.0 12.0498    
cufflinks 3.13319 0.0 9.66619   Low
cufflinks 7.62451 0.0 24.0116   High
cufflinks 5.0104 0.0 15.5224    
cufflinks 2.72728 0.0 8.60229   Low
cufflinks 6.05305 0.0 18.1726    
cufflinks 5.49617 0.0 16.4839    
cufflinks 4.30864 0.0 14.692    
cufflinks 2.201        
cufflinks 0.691       Low
cufflinks 2.152        
cufflinks 2.438        
cufflinks 2.621        
cufflinks 1.14        
cufflinks 2.138        
cufflinks 0.908       Low
cufflinks 2.787        
cufflinks 2.715        
cufflinks 2.328        
cufflinks 0.707       Low
cufflinks 2.463        
cufflinks 2.115        
cufflinks 0.813       Low
cufflinks 2.363        
cufflinks 0.694       Low

0 Strain