Gene : Glyma.05G031900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12363//PTHR12363:SF32 - TRANSPORTIN 3 AND IMPORTIN 13 Genomic Order:  319
Name:  ? Glyma.05G031900 Secondary Identifier:  ? PAC:30525320
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G031900 0.5kb upstream 0.5kb upstream 20744 true Chr05: 2766884-2787627 Glycine max
Glyma.05G031900 0.5kb upstream 0.5kb upstream 500 false Chr05: 2766884-2767383 Glycine max
Glyma.05G031900 0.5kb downstream 0.5kb downstream 20744 true Chr05: 2767384-2788127 Glycine max
Glyma.05G031900 0.5kb downstream 0.5kb downstream 500 false Chr05: 2787628-2788127 Glycine max
Glyma.05G031900 1.0kb upstream 1.0kb upstream 21244 true Chr05: 2766384-2787627 Glycine max
Glyma.05G031900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2766384-2767383 Glycine max
Glyma.05G031900 1.0kb downstream 1.0kb downstream 21244 true Chr05: 2767384-2788627 Glycine max
Glyma.05G031900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2787628-2788627 Glycine max
Glyma.05G031900 2.0kb upstream 2.0kb upstream 22244 true Chr05: 2765384-2787627 Glycine max
Glyma.05G031900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2765384-2767383 Glycine max
Glyma.05G031900 2.0kb downstream 2.0kb downstream 22244 true Chr05: 2767384-2789627 Glycine max
Glyma.05G031900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2787628-2789627 Glycine max
Glyma.05G031900 5.0kb upstream 5.0kb upstream 25244 true Chr05: 2762384-2787627 Glycine max
Glyma.05G031900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2762384-2767383 Glycine max
Glyma.05G031900 5.0kb downstream 5.0kb downstream 25244 true Chr05: 2767384-2792627 Glycine max
Glyma.05G031900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2787628-2792627 Glycine max
Glyma.05G031900 10.0kb upstream 10.0kb upstream 30244 true Chr05: 2757384-2787627 Glycine max
Glyma.05G031900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2757384-2767383 Glycine max
Glyma.05G031900 10.0kb downstream 10.0kb downstream 30244 true Chr05: 2767384-2797627 Glycine max
Glyma.05G031900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2787628-2797627 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299171 5265 Fabidae View MSA
124067010 5270 Rosid View MSA
123737335 5271 Pentapetalae View MSA
122791507 5272 Eudicot View MSA
122047073 5273 Angiosperm View MSA
121346085 5274 Embryophyte View MSA
123427248 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.5899 0.0 17.7116    
cufflinks 5.98531 0.0 16.1497   Low
cufflinks 7.04746 0.0 18.8758    
cufflinks 7.41905 0.0 19.8597    
cufflinks 9.71965 0.0 25.9308   High
cufflinks 6.31068 0.0 16.98    
cufflinks 8.07902 0.0 21.5949    
cufflinks 6.77885 0.0 18.1987    
cufflinks 7.37304 0.0 19.7366    
cufflinks 1.092        
cufflinks 0.538       Low
cufflinks 1.011        
cufflinks 1.486       High
cufflinks 1.608       High
cufflinks 0.776        
cufflinks 0.726        
cufflinks 1.169        
cufflinks 0.952        
cufflinks 1.28       High
cufflinks 0.563       Low
cufflinks 0.688        
cufflinks 0.726        
cufflinks 0.934        
cufflinks 0.801        
cufflinks 0.633       Low
cufflinks 0.863        

0 Strain