Gene : Glyma.05G029500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11527//PTHR11527:SF121 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY Genomic Order:  295
Name:  ? Glyma.05G029500 Secondary Identifier:  ? PAC:30526761
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G029500 0.5kb upstream 0.5kb upstream 2557 true Chr05: 2534689-2537245 Glycine max
Glyma.05G029500 0.5kb upstream 0.5kb upstream 500 false Chr05: 2534689-2535188 Glycine max
Glyma.05G029500 0.5kb downstream 0.5kb downstream 2557 true Chr05: 2535189-2537745 Glycine max
Glyma.05G029500 0.5kb downstream 0.5kb downstream 500 false Chr05: 2537246-2537745 Glycine max
Glyma.05G029500 1.0kb upstream 1.0kb upstream 3057 true Chr05: 2534189-2537245 Glycine max
Glyma.05G029500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2534189-2535188 Glycine max
Glyma.05G029500 1.0kb downstream 1.0kb downstream 3057 true Chr05: 2535189-2538245 Glycine max
Glyma.05G029500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2537246-2538245 Glycine max
Glyma.05G029500 2.0kb upstream 2.0kb upstream 4057 true Chr05: 2533189-2537245 Glycine max
Glyma.05G029500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2533189-2535188 Glycine max
Glyma.05G029500 2.0kb downstream 2.0kb downstream 4057 true Chr05: 2535189-2539245 Glycine max
Glyma.05G029500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2537246-2539245 Glycine max
Glyma.05G029500 5.0kb upstream 5.0kb upstream 7057 true Chr05: 2530189-2537245 Glycine max
Glyma.05G029500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2530189-2535188 Glycine max
Glyma.05G029500 5.0kb downstream 5.0kb downstream 7057 true Chr05: 2535189-2542245 Glycine max
Glyma.05G029500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2537246-2542245 Glycine max
Glyma.05G029500 10.0kb upstream 10.0kb upstream 12057 true Chr05: 2525189-2537245 Glycine max
Glyma.05G029500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2525189-2535188 Glycine max
Glyma.05G029500 10.0kb downstream 10.0kb downstream 12057 true Chr05: 2535189-2547245 Glycine max
Glyma.05G029500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2537246-2547245 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309456 5265 Fabidae View MSA
124069899 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.325782 0.0 1.61249   Low
cufflinks 0.430478 0.0 2.09692    
cufflinks 0.780431 0.0 3.51142    
cufflinks 0.47788 0.0 2.35542    
cufflinks 0.834608 0.0 3.74893    
cufflinks 0.730658 0.0 3.29749    
cufflinks 0.685456 0.0 4.14514    
cufflinks 0.464657 0.0 2.27811    
cufflinks 1.26122 0.0 6.89219   High
cufflinks 0.401        
cufflinks 0.446        
cufflinks 0.372        
cufflinks 1.216       High
cufflinks 0.342        
cufflinks 0.027     Low Low
cufflinks 0.442        
cufflinks 0.298        
cufflinks 0.698        
cufflinks 0.093     Low Low
cufflinks 1.591       High
cufflinks 0.597        
cufflinks 0.956        
cufflinks 0.18        
cufflinks 0.182        
cufflinks 0.879        
cufflinks 0.503        

0 Strain