Gene : Glyma.05G029800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10264:SF92 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 Genomic Order:  298
Name:  ? Glyma.05G029800 Secondary Identifier:  ? PAC:30524290
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G029800 0.5kb upstream 0.5kb upstream 4635 true Chr05: 2549902-2554536 Glycine max
Glyma.05G029800 0.5kb upstream 0.5kb upstream 500 false Chr05: 2554037-2554536 Glycine max
Glyma.05G029800 0.5kb downstream 0.5kb downstream 4635 true Chr05: 2549402-2554036 Glycine max
Glyma.05G029800 0.5kb downstream 0.5kb downstream 500 false Chr05: 2549402-2549901 Glycine max
Glyma.05G029800 1.0kb upstream 1.0kb upstream 5135 true Chr05: 2549902-2555036 Glycine max
Glyma.05G029800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2554037-2555036 Glycine max
Glyma.05G029800 1.0kb downstream 1.0kb downstream 5135 true Chr05: 2548902-2554036 Glycine max
Glyma.05G029800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2548902-2549901 Glycine max
Glyma.05G029800 2.0kb upstream 2.0kb upstream 6135 true Chr05: 2549902-2556036 Glycine max
Glyma.05G029800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2554037-2556036 Glycine max
Glyma.05G029800 2.0kb downstream 2.0kb downstream 6135 true Chr05: 2547902-2554036 Glycine max
Glyma.05G029800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2547902-2549901 Glycine max
Glyma.05G029800 5.0kb upstream 5.0kb upstream 9135 true Chr05: 2549902-2559036 Glycine max
Glyma.05G029800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2554037-2559036 Glycine max
Glyma.05G029800 5.0kb downstream 5.0kb downstream 9135 true Chr05: 2544902-2554036 Glycine max
Glyma.05G029800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2544902-2549901 Glycine max
Glyma.05G029800 10.0kb upstream 10.0kb upstream 14135 true Chr05: 2549902-2564036 Glycine max
Glyma.05G029800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2554037-2564036 Glycine max
Glyma.05G029800 10.0kb downstream 10.0kb downstream 14135 true Chr05: 2539902-2554036 Glycine max
Glyma.05G029800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2539902-2549901 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312030 5265 Fabidae View MSA
124068988 5270 Rosid View MSA
123744628 5271 Pentapetalae View MSA
122796204 5272 Eudicot View MSA
122042629 5273 Angiosperm View MSA
121344543 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.2978 0.0 162.33 High  
cufflinks 10.083 0.0 40.9081    
cufflinks 22.9553 0.0 87.5187 High  
cufflinks 10.2847 0.0 41.5551    
cufflinks 152.07 0.0 858.138 High High
cufflinks 60.8794 0.0 243.324 High  
cufflinks 4.53011 0.0 20.6499   Low
cufflinks 16.8437 0.0 64.4841    
cufflinks 368.47 0.0 3733.78 High High
cufflinks 1.393        
cufflinks 4.026        
cufflinks 2.352        
cufflinks 2.067        
cufflinks 0.332       Low
cufflinks 73.671     High High
cufflinks 3.326        
cufflinks 2.147        
cufflinks 1.968        
cufflinks 1.578        
cufflinks 4.093        
cufflinks 3.717        
cufflinks 4.573        
cufflinks 2.218        
cufflinks 3.061        
cufflinks 3.663        
cufflinks 2.858        

0 Strain