Gene : Glyma.05G030000 G. max Wm82.a2.v1
Defline:  (1 of 58) KOG0483 - Transcription factor HEX, contains HOX and HALZ domains Genomic Order:  300
Name:  ? Glyma.05G030000 Secondary Identifier:  ? PAC:30525291
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G030000 0.5kb upstream 0.5kb upstream 2796 true Chr05: 2580623-2583418 Glycine max
Glyma.05G030000 0.5kb upstream 0.5kb upstream 500 false Chr05: 2580623-2581122 Glycine max
Glyma.05G030000 0.5kb downstream 0.5kb downstream 2796 true Chr05: 2581123-2583918 Glycine max
Glyma.05G030000 0.5kb downstream 0.5kb downstream 500 false Chr05: 2583419-2583918 Glycine max
Glyma.05G030000 1.0kb upstream 1.0kb upstream 3296 true Chr05: 2580123-2583418 Glycine max
Glyma.05G030000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2580123-2581122 Glycine max
Glyma.05G030000 1.0kb downstream 1.0kb downstream 3296 true Chr05: 2581123-2584418 Glycine max
Glyma.05G030000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2583419-2584418 Glycine max
Glyma.05G030000 2.0kb upstream 2.0kb upstream 4296 true Chr05: 2579123-2583418 Glycine max
Glyma.05G030000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2579123-2581122 Glycine max
Glyma.05G030000 2.0kb downstream 2.0kb downstream 4296 true Chr05: 2581123-2585418 Glycine max
Glyma.05G030000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2583419-2585418 Glycine max
Glyma.05G030000 5.0kb upstream 5.0kb upstream 7296 true Chr05: 2576123-2583418 Glycine max
Glyma.05G030000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2576123-2581122 Glycine max
Glyma.05G030000 5.0kb downstream 5.0kb downstream 7296 true Chr05: 2581123-2588418 Glycine max
Glyma.05G030000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2583419-2588418 Glycine max
Glyma.05G030000 10.0kb upstream 10.0kb upstream 12296 true Chr05: 2571123-2583418 Glycine max
Glyma.05G030000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2571123-2581122 Glycine max
Glyma.05G030000 10.0kb downstream 10.0kb downstream 12296 true Chr05: 2581123-2593418 Glycine max
Glyma.05G030000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2583419-2593418 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304881 5265 Fabidae View MSA
124070886 5270 Rosid View MSA
123751160 5271 Pentapetalae View MSA
122797641 5272 Eudicot View MSA
122048587 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.1416 0.0 179.527 High  
cufflinks 62.2058 0.0 179.835 High  
cufflinks 13.1786 0.0 35.3718   Low
cufflinks 21.9038 0.0 58.5319 High Low
cufflinks 40.3256 0.0 111.222 High  
cufflinks 167.165 0.0 576.986 High High
cufflinks 43.2844 0.0 119.928 High  
cufflinks 93.5565 0.0 289.107 High  
cufflinks 35.7165 0.0 97.5381 High  
cufflinks 46.211     High High
cufflinks 11.539     High  
cufflinks 13.122     High  
cufflinks 43.987     High High
cufflinks 17.37     High  
cufflinks 3.767       Low
cufflinks 30.094     High  
cufflinks 11.536     High  
cufflinks 6.492       Low
cufflinks 36.961     High  
cufflinks 24.1     High  
cufflinks 17.758     High  
cufflinks 38.665     High  
cufflinks 34.664     High  
cufflinks 19.797     High  
cufflinks 26.566     High  
cufflinks 21.929     High  

0 Strain