Gene : Glyma.05G024800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31311:SF4 - GLYCOSYLTRANSFERASE 3-RELATED Genomic Order:  248
Name:  ? Glyma.05G024800 Secondary Identifier:  ? PAC:30527541
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5936 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G024800 0.5kb upstream 0.5kb upstream 2540 true Chr05: 2170120-2172659 Glycine max
Glyma.05G024800 0.5kb upstream 0.5kb upstream 500 false Chr05: 2172160-2172659 Glycine max
Glyma.05G024800 0.5kb downstream 0.5kb downstream 2540 true Chr05: 2169620-2172159 Glycine max
Glyma.05G024800 0.5kb downstream 0.5kb downstream 500 false Chr05: 2169620-2170119 Glycine max
Glyma.05G024800 1.0kb upstream 1.0kb upstream 3040 true Chr05: 2170120-2173159 Glycine max
Glyma.05G024800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2172160-2173159 Glycine max
Glyma.05G024800 1.0kb downstream 1.0kb downstream 3040 true Chr05: 2169120-2172159 Glycine max
Glyma.05G024800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2169120-2170119 Glycine max
Glyma.05G024800 2.0kb upstream 2.0kb upstream 4040 true Chr05: 2170120-2174159 Glycine max
Glyma.05G024800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2172160-2174159 Glycine max
Glyma.05G024800 2.0kb downstream 2.0kb downstream 4040 true Chr05: 2168120-2172159 Glycine max
Glyma.05G024800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2168120-2170119 Glycine max
Glyma.05G024800 5.0kb upstream 5.0kb upstream 7040 true Chr05: 2170120-2177159 Glycine max
Glyma.05G024800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2172160-2177159 Glycine max
Glyma.05G024800 5.0kb downstream 5.0kb downstream 7040 true Chr05: 2165120-2172159 Glycine max
Glyma.05G024800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2165120-2170119 Glycine max
Glyma.05G024800 10.0kb upstream 10.0kb upstream 12040 true Chr05: 2170120-2182159 Glycine max
Glyma.05G024800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2172160-2182159 Glycine max
Glyma.05G024800 10.0kb downstream 10.0kb downstream 12040 true Chr05: 2160120-2172159 Glycine max
Glyma.05G024800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2160120-2170119 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311174 5265 Fabidae View MSA
124066918 5270 Rosid View MSA
123741049 5271 Pentapetalae View MSA
122787674 5272 Eudicot View MSA
122047290 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4157 0.0 28.0601    
cufflinks 9.26503 0.0 25.1272    
cufflinks 8.90327 0.0 24.227   Low
cufflinks 16.3185 0.0 43.536    
cufflinks 20.4138 0.0 54.6429 High High
cufflinks 21.8979 0.0 58.735   High
cufflinks 9.32805 0.0 25.2671    
cufflinks 18.6861 0.0 49.9032    
cufflinks 11.3799 0.0 30.5386    
cufflinks 22.837     High High
cufflinks 3.535       Low
cufflinks 9.623     High  
cufflinks 15.269     High High
cufflinks 20.225     High High
cufflinks 3.231       Low
cufflinks 6.355        
cufflinks 15.236     High High
cufflinks 19.44     High High
cufflinks 10.535     High  
cufflinks 4.611        
cufflinks 3.872       Low
cufflinks 5.541        
cufflinks 7.436        
cufflinks 5.63        
cufflinks 4.448        
cufflinks 6.686     High  

0 Strain