Gene : Glyma.05G025100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Genomic Order:  251
Name:  ? Glyma.05G025100 Secondary Identifier:  ? PAC:30523813
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G025100 0.5kb upstream 0.5kb upstream 4159 true Chr05: 2185131-2189289 Glycine max
Glyma.05G025100 0.5kb upstream 0.5kb upstream 500 false Chr05: 2188790-2189289 Glycine max
Glyma.05G025100 0.5kb downstream 0.5kb downstream 4159 true Chr05: 2184631-2188789 Glycine max
Glyma.05G025100 0.5kb downstream 0.5kb downstream 500 false Chr05: 2184631-2185130 Glycine max
Glyma.05G025100 1.0kb upstream 1.0kb upstream 4659 true Chr05: 2185131-2189789 Glycine max
Glyma.05G025100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2188790-2189789 Glycine max
Glyma.05G025100 1.0kb downstream 1.0kb downstream 4659 true Chr05: 2184131-2188789 Glycine max
Glyma.05G025100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2184131-2185130 Glycine max
Glyma.05G025100 2.0kb upstream 2.0kb upstream 5659 true Chr05: 2185131-2190789 Glycine max
Glyma.05G025100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2188790-2190789 Glycine max
Glyma.05G025100 2.0kb downstream 2.0kb downstream 5659 true Chr05: 2183131-2188789 Glycine max
Glyma.05G025100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2183131-2185130 Glycine max
Glyma.05G025100 5.0kb upstream 5.0kb upstream 8659 true Chr05: 2185131-2193789 Glycine max
Glyma.05G025100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2188790-2193789 Glycine max
Glyma.05G025100 5.0kb downstream 5.0kb downstream 8659 true Chr05: 2180131-2188789 Glycine max
Glyma.05G025100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2180131-2185130 Glycine max
Glyma.05G025100 10.0kb upstream 10.0kb upstream 13659 true Chr05: 2185131-2198789 Glycine max
Glyma.05G025100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2188790-2198789 Glycine max
Glyma.05G025100 10.0kb downstream 10.0kb downstream 13659 true Chr05: 2175131-2188789 Glycine max
Glyma.05G025100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2175131-2185130 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307500 5265 Fabidae View MSA
124064208 5270 Rosid View MSA
123738058 5271 Pentapetalae View MSA
122790887 5272 Eudicot View MSA
122046626 5273 Angiosperm View MSA
121346435 5274 Embryophyte View MSA
123380384 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.95451 0.0 19.399    
cufflinks 4.0854 0.0 12.1093    
cufflinks 72.3102 0.0 215.51 High High
cufflinks 3.31528 0.0 10.137    
cufflinks 4.6683 0.0 13.6123    
cufflinks 5.82105 0.0 16.5096    
cufflinks 3.89852 0.0 11.6892    
cufflinks 4.94302 0.0 14.2922    
cufflinks 5.19655 0.0 14.9225    
cufflinks 2.642        
cufflinks 2.676        
cufflinks 17.409     High High
cufflinks 3.899        
cufflinks 2.938        
cufflinks 1.904       Low
cufflinks 3.293        
cufflinks 1.829       Low
cufflinks 4.054        
cufflinks 2.246        
cufflinks 3.077        
cufflinks 2.594        
cufflinks 3.76        
cufflinks 3.308        
cufflinks 2.89        
cufflinks 2.721        
cufflinks 2.887        

0 Strain