Gene : Glyma.05G025400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31889:SF2 - FUCOSYLTRANSFERASE 2-RELATED Genomic Order:  254
Name:  ? Glyma.05G025400 Secondary Identifier:  ? PAC:30524799
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G025400 0.5kb upstream 0.5kb upstream 2653 true Chr05: 2207893-2210545 Glycine max
Glyma.05G025400 0.5kb upstream 0.5kb upstream 500 false Chr05: 2207893-2208392 Glycine max
Glyma.05G025400 0.5kb downstream 0.5kb downstream 2653 true Chr05: 2208393-2211045 Glycine max
Glyma.05G025400 0.5kb downstream 0.5kb downstream 500 false Chr05: 2210546-2211045 Glycine max
Glyma.05G025400 1.0kb upstream 1.0kb upstream 3153 true Chr05: 2207393-2210545 Glycine max
Glyma.05G025400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2207393-2208392 Glycine max
Glyma.05G025400 1.0kb downstream 1.0kb downstream 3153 true Chr05: 2208393-2211545 Glycine max
Glyma.05G025400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2210546-2211545 Glycine max
Glyma.05G025400 2.0kb upstream 2.0kb upstream 4153 true Chr05: 2206393-2210545 Glycine max
Glyma.05G025400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2206393-2208392 Glycine max
Glyma.05G025400 2.0kb downstream 2.0kb downstream 4153 true Chr05: 2208393-2212545 Glycine max
Glyma.05G025400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2210546-2212545 Glycine max
Glyma.05G025400 5.0kb upstream 5.0kb upstream 7153 true Chr05: 2203393-2210545 Glycine max
Glyma.05G025400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2203393-2208392 Glycine max
Glyma.05G025400 5.0kb downstream 5.0kb downstream 7153 true Chr05: 2208393-2215545 Glycine max
Glyma.05G025400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2210546-2215545 Glycine max
Glyma.05G025400 10.0kb upstream 10.0kb upstream 12153 true Chr05: 2198393-2210545 Glycine max
Glyma.05G025400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2198393-2208392 Glycine max
Glyma.05G025400 10.0kb downstream 10.0kb downstream 12153 true Chr05: 2208393-2220545 Glycine max
Glyma.05G025400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2210546-2220545 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307646 5265 Fabidae View MSA
124069231 5270 Rosid View MSA
123743529 5271 Pentapetalae View MSA
122787237 5272 Eudicot View MSA
122051157 5273 Angiosperm View MSA
121351526 5274 Embryophyte View MSA
123427849 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.19895 0.0 17.5232    
cufflinks 20.1537 0.0 53.8097   High
cufflinks 4.33131 0.0 12.722   Low
cufflinks 18.0666 0.0 48.2005   High
cufflinks 8.66834 0.0 23.7739    
cufflinks 7.99994 0.0 22.0471    
cufflinks 12.9558 0.0 34.7843    
cufflinks 9.28043 0.0 25.2814    
cufflinks 6.62798 0.0 18.5745    
cufflinks 13.055     High  
cufflinks 0.089       Low
cufflinks 7.49     High  
cufflinks 6.84        
cufflinks 7.096     High  
cufflinks 0.42       Low
cufflinks 17.143     High  
cufflinks 0.536        
cufflinks 10.853     High  
cufflinks 20.958     High  
cufflinks 12.487     High  
cufflinks 0.286       Low
cufflinks 19.0     High  
cufflinks 23.301     High High
cufflinks 0.338       Low
cufflinks 15.64     High  
cufflinks 0.363       Low

0 Strain