Gene : Glyma.05G026200 G. max Wm82.a2.v1
Defline:  (1 of 3) 1.3.1.83 - Geranylgeranyl diphosphate reductase / Geranylgeranyl reductase Genomic Order:  262
Name:  ? Glyma.05G026200 Secondary Identifier:  ? PAC:30527184
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5063 Glycine max pathologic  
Gmax PWY-5064 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G026200 0.5kb upstream 0.5kb upstream 2741 true Chr05: 2281268-2284008 Glycine max
Glyma.05G026200 0.5kb upstream 0.5kb upstream 500 false Chr05: 2281268-2281767 Glycine max
Glyma.05G026200 0.5kb downstream 0.5kb downstream 2741 true Chr05: 2281768-2284508 Glycine max
Glyma.05G026200 0.5kb downstream 0.5kb downstream 500 false Chr05: 2284009-2284508 Glycine max
Glyma.05G026200 1.0kb upstream 1.0kb upstream 3241 true Chr05: 2280768-2284008 Glycine max
Glyma.05G026200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2280768-2281767 Glycine max
Glyma.05G026200 1.0kb downstream 1.0kb downstream 3241 true Chr05: 2281768-2285008 Glycine max
Glyma.05G026200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2284009-2285008 Glycine max
Glyma.05G026200 2.0kb upstream 2.0kb upstream 4241 true Chr05: 2279768-2284008 Glycine max
Glyma.05G026200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2279768-2281767 Glycine max
Glyma.05G026200 2.0kb downstream 2.0kb downstream 4241 true Chr05: 2281768-2286008 Glycine max
Glyma.05G026200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2284009-2286008 Glycine max
Glyma.05G026200 5.0kb upstream 5.0kb upstream 7241 true Chr05: 2276768-2284008 Glycine max
Glyma.05G026200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2276768-2281767 Glycine max
Glyma.05G026200 5.0kb downstream 5.0kb downstream 7241 true Chr05: 2281768-2289008 Glycine max
Glyma.05G026200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2284009-2289008 Glycine max
Glyma.05G026200 10.0kb upstream 10.0kb upstream 12241 true Chr05: 2271768-2284008 Glycine max
Glyma.05G026200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2271768-2281767 Glycine max
Glyma.05G026200 10.0kb downstream 10.0kb downstream 12241 true Chr05: 2281768-2294008 Glycine max
Glyma.05G026200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2284009-2294008 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305502 5265 Fabidae View MSA
124070478 5270 Rosid View MSA
123742493 5271 Pentapetalae View MSA
122794040 5272 Eudicot View MSA
122041542 5273 Angiosperm View MSA
121345615 5274 Embryophyte View MSA
123424772 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 87.9838 0.0 278.808 High  
cufflinks 131.471 0.0 448.766 High High
cufflinks 33.1382 0.0 91.1353 High  
cufflinks 61.1385 0.0 181.337 High  
cufflinks 26.2175 0.0 71.3095 High  
cufflinks 21.4188 0.0 57.5586   Low
cufflinks 123.119 0.0 419.043 High High
cufflinks 37.9823 0.0 106.034 High  
cufflinks 16.663 0.0 44.4803   Low
cufflinks 57.785     High  
cufflinks 6.585     High  
cufflinks 47.59     High  
cufflinks 3.906       Low
cufflinks 1.851       Low
cufflinks 41.843     High  
cufflinks 262.329     High High
cufflinks 2.382       Low
cufflinks 75.602     High  
cufflinks 107.092     High  
cufflinks 352.024     High High
cufflinks 9.97     High  
cufflinks 311.194     High High
cufflinks 183.469     High  
cufflinks 8.312     High  
cufflinks 329.888     High High
cufflinks 7.09     High  

0 Strain