Gene : Glyma.05G026300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11540:SF14 - MALATE DEHYDROGENASE, CHLOROPLASTIC Genomic Order:  263
Name:  ? Glyma.05G026300 Secondary Identifier:  ? PAC:30526954
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax GLYOXYLATE-BYPASS Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-7115 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G026300 0.5kb upstream 0.5kb upstream 2563 true Chr05: 2284168-2286730 Glycine max
Glyma.05G026300 0.5kb upstream 0.5kb upstream 500 false Chr05: 2284168-2284667 Glycine max
Glyma.05G026300 0.5kb downstream 0.5kb downstream 2563 true Chr05: 2284668-2287230 Glycine max
Glyma.05G026300 0.5kb downstream 0.5kb downstream 500 false Chr05: 2286731-2287230 Glycine max
Glyma.05G026300 1.0kb upstream 1.0kb upstream 3063 true Chr05: 2283668-2286730 Glycine max
Glyma.05G026300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2283668-2284667 Glycine max
Glyma.05G026300 1.0kb downstream 1.0kb downstream 3063 true Chr05: 2284668-2287730 Glycine max
Glyma.05G026300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2286731-2287730 Glycine max
Glyma.05G026300 2.0kb upstream 2.0kb upstream 4063 true Chr05: 2282668-2286730 Glycine max
Glyma.05G026300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2282668-2284667 Glycine max
Glyma.05G026300 2.0kb downstream 2.0kb downstream 4063 true Chr05: 2284668-2288730 Glycine max
Glyma.05G026300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2286731-2288730 Glycine max
Glyma.05G026300 5.0kb upstream 5.0kb upstream 7063 true Chr05: 2279668-2286730 Glycine max
Glyma.05G026300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2279668-2284667 Glycine max
Glyma.05G026300 5.0kb downstream 5.0kb downstream 7063 true Chr05: 2284668-2291730 Glycine max
Glyma.05G026300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2286731-2291730 Glycine max
Glyma.05G026300 10.0kb upstream 10.0kb upstream 12063 true Chr05: 2274668-2286730 Glycine max
Glyma.05G026300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2274668-2284667 Glycine max
Glyma.05G026300 10.0kb downstream 10.0kb downstream 12063 true Chr05: 2284668-2296730 Glycine max
Glyma.05G026300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2286731-2296730 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313004 5265 Fabidae View MSA
124067628 5270 Rosid View MSA
123748297 5271 Pentapetalae View MSA
122785823 5272 Eudicot View MSA
122049358 5273 Angiosperm View MSA
121344647 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.3778 0.0 51.7411    
cufflinks 19.84 0.0 52.9946    
cufflinks 9.68968 0.0 26.2451   Low
cufflinks 20.3681 0.0 54.4336 High  
cufflinks 31.9151 0.0 86.9495 High  
cufflinks 31.2967 0.0 85.2209 High  
cufflinks 47.1625 0.0 133.144 High High
cufflinks 18.3466 0.0 48.9667    
cufflinks 30.4818 0.0 82.859 High  
cufflinks 16.917     High  
cufflinks 2.095       Low
cufflinks 10.566     High  
cufflinks 27.015     High High
cufflinks 34.107     High High
cufflinks 9.689     High  
cufflinks 12.156     High  
cufflinks 9.661     High  
cufflinks 20.683     High  
cufflinks 19.037     High  
cufflinks 10.201     High  
cufflinks 5.265       Low
cufflinks 11.617     High  
cufflinks 19.454     High  
cufflinks 5.396       Low
cufflinks 11.154     High  
cufflinks 5.233       Low

0 Strain