Gene : Glyma.05G051300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Genomic Order:  513
Name:  ? Glyma.05G051300 Secondary Identifier:  ? PAC:30527495
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G051300 0.5kb upstream 0.5kb upstream 5087 true Chr05: 4587268-4592354 Glycine max
Glyma.05G051300 0.5kb upstream 0.5kb upstream 500 false Chr05: 4591855-4592354 Glycine max
Glyma.05G051300 0.5kb downstream 0.5kb downstream 5087 true Chr05: 4586768-4591854 Glycine max
Glyma.05G051300 0.5kb downstream 0.5kb downstream 500 false Chr05: 4586768-4587267 Glycine max
Glyma.05G051300 1.0kb upstream 1.0kb upstream 5587 true Chr05: 4587268-4592854 Glycine max
Glyma.05G051300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4591855-4592854 Glycine max
Glyma.05G051300 1.0kb downstream 1.0kb downstream 5587 true Chr05: 4586268-4591854 Glycine max
Glyma.05G051300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4586268-4587267 Glycine max
Glyma.05G051300 2.0kb upstream 2.0kb upstream 6587 true Chr05: 4587268-4593854 Glycine max
Glyma.05G051300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4591855-4593854 Glycine max
Glyma.05G051300 2.0kb downstream 2.0kb downstream 6587 true Chr05: 4585268-4591854 Glycine max
Glyma.05G051300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4585268-4587267 Glycine max
Glyma.05G051300 5.0kb upstream 5.0kb upstream 9587 true Chr05: 4587268-4596854 Glycine max
Glyma.05G051300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4591855-4596854 Glycine max
Glyma.05G051300 5.0kb downstream 5.0kb downstream 9587 true Chr05: 4582268-4591854 Glycine max
Glyma.05G051300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4582268-4587267 Glycine max
Glyma.05G051300 10.0kb upstream 10.0kb upstream 14587 true Chr05: 4587268-4601854 Glycine max
Glyma.05G051300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4591855-4601854 Glycine max
Glyma.05G051300 10.0kb downstream 10.0kb downstream 14587 true Chr05: 4577268-4591854 Glycine max
Glyma.05G051300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4577268-4587267 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312093 5265 Fabidae View MSA
124060834 5270 Rosid View MSA
123741079 5271 Pentapetalae View MSA
122790680 5272 Eudicot View MSA
122043689 5273 Angiosperm View MSA
121345999 5274 Embryophyte View MSA
123428179 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 121.855 0.0 375.399 High High
cufflinks 37.7738 0.0 102.007 High  
cufflinks 15.3822 0.0 41.372    
cufflinks 36.1397 0.0 97.3557 High  
cufflinks 1.96504 0.0 6.71536   Low
cufflinks 1.63665 0.0 5.68628   Low
cufflinks 24.3643 0.0 65.001 High  
cufflinks 26.2866 0.0 70.1859 High  
cufflinks 1.9729 0.0 6.7169   Low
cufflinks 6.4        
cufflinks 0.009     Low Low
cufflinks 4.673        
cufflinks 0.01     Low Low
cufflinks 0.003     Low Low
cufflinks 0.243        
cufflinks 32.376     High High
cufflinks 0.007     Low Low
cufflinks 5.183        
cufflinks 8.257     High  
cufflinks 37.636     High High
cufflinks 0.014     Low Low
cufflinks 37.111     High High
cufflinks 21.761     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 41.575     High High
cufflinks 0.009     Low Low

0 Strain