Gene : Glyma.05G047100 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10891//PTHR10891:SF621 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Genomic Order:  471
Name:  ? Glyma.05G047100 Secondary Identifier:  ? PAC:30525199
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G047100 0.5kb upstream 0.5kb upstream 1355 true Chr05: 4188163-4189517 Glycine max
Glyma.05G047100 0.5kb upstream 0.5kb upstream 500 false Chr05: 4188163-4188662 Glycine max
Glyma.05G047100 0.5kb downstream 0.5kb downstream 1355 true Chr05: 4188663-4190017 Glycine max
Glyma.05G047100 0.5kb downstream 0.5kb downstream 500 false Chr05: 4189518-4190017 Glycine max
Glyma.05G047100 1.0kb upstream 1.0kb upstream 1855 true Chr05: 4187663-4189517 Glycine max
Glyma.05G047100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4187663-4188662 Glycine max
Glyma.05G047100 1.0kb downstream 1.0kb downstream 1855 true Chr05: 4188663-4190517 Glycine max
Glyma.05G047100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4189518-4190517 Glycine max
Glyma.05G047100 2.0kb upstream 2.0kb upstream 2855 true Chr05: 4186663-4189517 Glycine max
Glyma.05G047100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4186663-4188662 Glycine max
Glyma.05G047100 2.0kb downstream 2.0kb downstream 2855 true Chr05: 4188663-4191517 Glycine max
Glyma.05G047100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4189518-4191517 Glycine max
Glyma.05G047100 5.0kb upstream 5.0kb upstream 5855 true Chr05: 4183663-4189517 Glycine max
Glyma.05G047100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4183663-4188662 Glycine max
Glyma.05G047100 5.0kb downstream 5.0kb downstream 5855 true Chr05: 4188663-4194517 Glycine max
Glyma.05G047100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4189518-4194517 Glycine max
Glyma.05G047100 10.0kb upstream 10.0kb upstream 10855 true Chr05: 4178663-4189517 Glycine max
Glyma.05G047100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4178663-4188662 Glycine max
Glyma.05G047100 10.0kb downstream 10.0kb downstream 10855 true Chr05: 4188663-4199517 Glycine max
Glyma.05G047100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4189518-4199517 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309759 5265 Fabidae View MSA
124071613 5270 Rosid View MSA
123747964 5271 Pentapetalae View MSA
122795822 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.49931 0.0 25.799   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0174808 0.0 0.0827058 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.39875 0.0 1.54884    
cufflinks 2.57056 0.0 9.03745    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.290721 0.0 1.14258    
cufflinks 4.365        
cufflinks 170.325     High High
cufflinks 1.179        
cufflinks 4.407        
cufflinks 0.767        
cufflinks 16.106     High  
cufflinks 0.701        
cufflinks 567.992     High High
cufflinks 0.825        
cufflinks 0.057     Low Low
cufflinks 0.38        
cufflinks 63.684     High  
cufflinks 0.35        
cufflinks 0.406        
cufflinks 93.267     High High
cufflinks 0.052     Low Low
cufflinks 212.362     High High

0 Strain