Gene : Glyma.05G047300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12961 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 Genomic Order:  473
Name:  ? Glyma.05G047300 Secondary Identifier:  ? PAC:30526205
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G047300 0.5kb upstream 0.5kb upstream 7210 true Chr05: 4196156-4203365 Glycine max
Glyma.05G047300 0.5kb upstream 0.5kb upstream 500 false Chr05: 4202866-4203365 Glycine max
Glyma.05G047300 0.5kb downstream 0.5kb downstream 7210 true Chr05: 4195656-4202865 Glycine max
Glyma.05G047300 0.5kb downstream 0.5kb downstream 500 false Chr05: 4195656-4196155 Glycine max
Glyma.05G047300 1.0kb upstream 1.0kb upstream 7710 true Chr05: 4196156-4203865 Glycine max
Glyma.05G047300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4202866-4203865 Glycine max
Glyma.05G047300 1.0kb downstream 1.0kb downstream 7710 true Chr05: 4195156-4202865 Glycine max
Glyma.05G047300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4195156-4196155 Glycine max
Glyma.05G047300 2.0kb upstream 2.0kb upstream 8710 true Chr05: 4196156-4204865 Glycine max
Glyma.05G047300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4202866-4204865 Glycine max
Glyma.05G047300 2.0kb downstream 2.0kb downstream 8710 true Chr05: 4194156-4202865 Glycine max
Glyma.05G047300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4194156-4196155 Glycine max
Glyma.05G047300 5.0kb upstream 5.0kb upstream 11710 true Chr05: 4196156-4207865 Glycine max
Glyma.05G047300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4202866-4207865 Glycine max
Glyma.05G047300 5.0kb downstream 5.0kb downstream 11710 true Chr05: 4191156-4202865 Glycine max
Glyma.05G047300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4191156-4196155 Glycine max
Glyma.05G047300 10.0kb upstream 10.0kb upstream 16710 true Chr05: 4196156-4212865 Glycine max
Glyma.05G047300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4202866-4212865 Glycine max
Glyma.05G047300 10.0kb downstream 10.0kb downstream 16710 true Chr05: 4186156-4202865 Glycine max
Glyma.05G047300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4186156-4196155 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303387 5265 Fabidae View MSA
124060440 5270 Rosid View MSA
123737600 5271 Pentapetalae View MSA
122792763 5272 Eudicot View MSA
122042143 5273 Angiosperm View MSA
121348897 5274 Embryophyte View MSA
123428033 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.31154 0.0 17.1562    
cufflinks 5.95297 0.0 16.2464    
cufflinks 4.25241 0.0 11.9149   Low
cufflinks 10.4042 0.0 27.7745   High
cufflinks 10.2927 0.0 27.4784   High
cufflinks 6.66824 0.0 18.0594    
cufflinks 6.92001 0.0 18.7364    
cufflinks 10.6577 0.0 28.4448   High
cufflinks 5.94182 0.0 16.2081    
cufflinks 5.352       High
cufflinks 0.547       Low
cufflinks 2.285        
cufflinks 4.244        
cufflinks 5.759       High
cufflinks 0.591       Low
cufflinks 3.192        
cufflinks 1.969        
cufflinks 3.887        
cufflinks 3.502        
cufflinks 2.628        
cufflinks 1.036       Low
cufflinks 3.03        
cufflinks 3.341        
cufflinks 0.876       Low
cufflinks 2.589        
cufflinks 1.926        

0 Strain