Gene : Glyma.05G042000 G. max Wm82.a2.v1
Defline:  (1 of 31) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  420
Name:  ? Glyma.05G042000 Secondary Identifier:  ? PAC:30526992
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G042000 0.5kb upstream 0.5kb upstream 2733 true Chr05: 3762354-3765086 Glycine max
Glyma.05G042000 0.5kb upstream 0.5kb upstream 500 false Chr05: 3762354-3762853 Glycine max
Glyma.05G042000 0.5kb downstream 0.5kb downstream 2733 true Chr05: 3762854-3765586 Glycine max
Glyma.05G042000 0.5kb downstream 0.5kb downstream 500 false Chr05: 3765087-3765586 Glycine max
Glyma.05G042000 1.0kb upstream 1.0kb upstream 3233 true Chr05: 3761854-3765086 Glycine max
Glyma.05G042000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3761854-3762853 Glycine max
Glyma.05G042000 1.0kb downstream 1.0kb downstream 3233 true Chr05: 3762854-3766086 Glycine max
Glyma.05G042000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3765087-3766086 Glycine max
Glyma.05G042000 2.0kb upstream 2.0kb upstream 4233 true Chr05: 3760854-3765086 Glycine max
Glyma.05G042000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3760854-3762853 Glycine max
Glyma.05G042000 2.0kb downstream 2.0kb downstream 4233 true Chr05: 3762854-3767086 Glycine max
Glyma.05G042000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3765087-3767086 Glycine max
Glyma.05G042000 5.0kb upstream 5.0kb upstream 7233 true Chr05: 3757854-3765086 Glycine max
Glyma.05G042000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3757854-3762853 Glycine max
Glyma.05G042000 5.0kb downstream 5.0kb downstream 7233 true Chr05: 3762854-3770086 Glycine max
Glyma.05G042000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3765087-3770086 Glycine max
Glyma.05G042000 10.0kb upstream 10.0kb upstream 12233 true Chr05: 3752854-3765086 Glycine max
Glyma.05G042000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3752854-3762853 Glycine max
Glyma.05G042000 10.0kb downstream 10.0kb downstream 12233 true Chr05: 3762854-3775086 Glycine max
Glyma.05G042000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3765087-3775086 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314402 5265 Fabidae View MSA
124072827 5270 Rosid View MSA
123746466 5271 Pentapetalae View MSA
122797152 5272 Eudicot View MSA
122048974 5273 Angiosperm View MSA
121311194 5274 Embryophyte View MSA
123348523 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.208225 0.0 1.05172 Low  
cufflinks 0.630435 0.0 2.86434    
cufflinks 0.271983 0.0 1.35873    
cufflinks 16.2238 0.0 55.6066   High
cufflinks 0.587998 0.0 2.64951    
cufflinks 0.223697 0.0 1.06973 Low  
cufflinks 12.7619 0.0 38.2443   High
cufflinks 1.70478 0.0 6.10392    
cufflinks 0.41272 0.0 2.00496    
cufflinks 0.86       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.288        
cufflinks 0.068     Low  
cufflinks 0.426        
cufflinks 0.013     Low Low
cufflinks 0.084     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.993       High
cufflinks 0.242        
cufflinks 0.044     Low  
cufflinks 0.004     Low Low
cufflinks 0.063     Low  
cufflinks 0.037     Low  
cufflinks 0.005     Low Low
cufflinks 0.103        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain