Gene : Glyma.05G042700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24058//PTHR24058:SF58 - DUAL SPECIFICITY PROTEIN KINASE Genomic Order:  427
Name:  ? Glyma.05G042700 Secondary Identifier:  ? PAC:30524529
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G042700 0.5kb upstream 0.5kb upstream 6986 true Chr05: 3826098-3833083 Glycine max
Glyma.05G042700 0.5kb upstream 0.5kb upstream 500 false Chr05: 3832584-3833083 Glycine max
Glyma.05G042700 0.5kb downstream 0.5kb downstream 6986 true Chr05: 3825598-3832583 Glycine max
Glyma.05G042700 0.5kb downstream 0.5kb downstream 500 false Chr05: 3825598-3826097 Glycine max
Glyma.05G042700 1.0kb upstream 1.0kb upstream 7486 true Chr05: 3826098-3833583 Glycine max
Glyma.05G042700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3832584-3833583 Glycine max
Glyma.05G042700 1.0kb downstream 1.0kb downstream 7486 true Chr05: 3825098-3832583 Glycine max
Glyma.05G042700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3825098-3826097 Glycine max
Glyma.05G042700 2.0kb upstream 2.0kb upstream 8486 true Chr05: 3826098-3834583 Glycine max
Glyma.05G042700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3832584-3834583 Glycine max
Glyma.05G042700 2.0kb downstream 2.0kb downstream 8486 true Chr05: 3824098-3832583 Glycine max
Glyma.05G042700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3824098-3826097 Glycine max
Glyma.05G042700 5.0kb upstream 5.0kb upstream 11486 true Chr05: 3826098-3837583 Glycine max
Glyma.05G042700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3832584-3837583 Glycine max
Glyma.05G042700 5.0kb downstream 5.0kb downstream 11486 true Chr05: 3821098-3832583 Glycine max
Glyma.05G042700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3821098-3826097 Glycine max
Glyma.05G042700 10.0kb upstream 10.0kb upstream 16486 true Chr05: 3826098-3842583 Glycine max
Glyma.05G042700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3832584-3842583 Glycine max
Glyma.05G042700 10.0kb downstream 10.0kb downstream 16486 true Chr05: 3816098-3832583 Glycine max
Glyma.05G042700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3816098-3826097 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301872 5265 Fabidae View MSA
124066575 5270 Rosid View MSA
123751115 5271 Pentapetalae View MSA
122792813 5272 Eudicot View MSA
122041750 5273 Angiosperm View MSA
121349585 5274 Embryophyte View MSA
123426533 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.2254 0.0 66.4938    
cufflinks 15.2735 0.0 55.8872    
cufflinks 18.4612 0.0 68.8807    
cufflinks 16.3582 0.0 58.4572    
cufflinks 16.2626 0.0 62.0771    
cufflinks 22.27 0.0 87.7649   High
cufflinks 12.6911 0.0 47.3674   Low
cufflinks 17.6565 0.0 65.2656    
cufflinks 15.4007 0.0 57.3742    
cufflinks 2.459       Low
cufflinks 3.88       High
cufflinks 2.91        
cufflinks 2.956        
cufflinks 2.999        
cufflinks 2.916        
cufflinks 2.603       Low
cufflinks 4.346       High
cufflinks 3.331        
cufflinks 2.812        
cufflinks 2.769        
cufflinks 3.207        
cufflinks 2.79        
cufflinks 3.194        
cufflinks 3.368        
cufflinks 2.717        
cufflinks 3.748       High

0 Strain