Gene : Glyma.05G044500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR14145:SF1 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 6 Genomic Order:  445
Name:  ? Glyma.05G044500 Secondary Identifier:  ? PAC:30527400
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G044500 0.5kb upstream 0.5kb upstream 4335 true Chr05: 3974891-3979225 Glycine max
Glyma.05G044500 0.5kb upstream 0.5kb upstream 500 false Chr05: 3974891-3975390 Glycine max
Glyma.05G044500 0.5kb downstream 0.5kb downstream 4335 true Chr05: 3975391-3979725 Glycine max
Glyma.05G044500 0.5kb downstream 0.5kb downstream 500 false Chr05: 3979226-3979725 Glycine max
Glyma.05G044500 1.0kb upstream 1.0kb upstream 4835 true Chr05: 3974391-3979225 Glycine max
Glyma.05G044500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3974391-3975390 Glycine max
Glyma.05G044500 1.0kb downstream 1.0kb downstream 4835 true Chr05: 3975391-3980225 Glycine max
Glyma.05G044500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3979226-3980225 Glycine max
Glyma.05G044500 2.0kb upstream 2.0kb upstream 5835 true Chr05: 3973391-3979225 Glycine max
Glyma.05G044500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3973391-3975390 Glycine max
Glyma.05G044500 2.0kb downstream 2.0kb downstream 5835 true Chr05: 3975391-3981225 Glycine max
Glyma.05G044500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3979226-3981225 Glycine max
Glyma.05G044500 5.0kb upstream 5.0kb upstream 8835 true Chr05: 3970391-3979225 Glycine max
Glyma.05G044500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3970391-3975390 Glycine max
Glyma.05G044500 5.0kb downstream 5.0kb downstream 8835 true Chr05: 3975391-3984225 Glycine max
Glyma.05G044500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3979226-3984225 Glycine max
Glyma.05G044500 10.0kb upstream 10.0kb upstream 13835 true Chr05: 3965391-3979225 Glycine max
Glyma.05G044500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3965391-3975390 Glycine max
Glyma.05G044500 10.0kb downstream 10.0kb downstream 13835 true Chr05: 3975391-3989225 Glycine max
Glyma.05G044500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3979226-3989225 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307405 5265 Fabidae View MSA
124061166 5270 Rosid View MSA
123736562 5271 Pentapetalae View MSA
122788737 5272 Eudicot View MSA
122047339 5273 Angiosperm View MSA
121344552 5274 Embryophyte View MSA
123425003 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.59648 0.0 18.8898   Low
cufflinks 12.7248 0.0 34.4267    
cufflinks 7.78589 0.0 21.8606   Low
cufflinks 15.7988 0.0 42.3446    
cufflinks 15.162 0.0 40.7081    
cufflinks 17.1707 0.0 45.9235   High
cufflinks 10.3477 0.0 28.4033    
cufflinks 14.5692 0.0 39.1559    
cufflinks 10.4014 0.0 28.4831    
cufflinks 5.367        
cufflinks 1.508       Low
cufflinks 6.062        
cufflinks 9.386     High High
cufflinks 11.529     High High
cufflinks 1.101       Low
cufflinks 4.582        
cufflinks 3.551        
cufflinks 6.891        
cufflinks 6.725        
cufflinks 4.01        
cufflinks 1.717       Low
cufflinks 4.214        
cufflinks 4.966        
cufflinks 2.476        
cufflinks 4.769        
cufflinks 2.644        

0 Strain