Gene : Glyma.05G045300 G. max Wm82.a2.v1
Defline:  (1 of 118) PF03514 - GRAS domain family (GRAS) Genomic Order:  453
Name:  ? Glyma.05G045300 Secondary Identifier:  ? PAC:30524123
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G045300 0.5kb upstream 0.5kb upstream 2365 true Chr05: 4023950-4026314 Glycine max
Glyma.05G045300 0.5kb upstream 0.5kb upstream 500 false Chr05: 4025815-4026314 Glycine max
Glyma.05G045300 0.5kb downstream 0.5kb downstream 2365 true Chr05: 4023450-4025814 Glycine max
Glyma.05G045300 0.5kb downstream 0.5kb downstream 500 false Chr05: 4023450-4023949 Glycine max
Glyma.05G045300 1.0kb upstream 1.0kb upstream 2865 true Chr05: 4023950-4026814 Glycine max
Glyma.05G045300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4025815-4026814 Glycine max
Glyma.05G045300 1.0kb downstream 1.0kb downstream 2865 true Chr05: 4022950-4025814 Glycine max
Glyma.05G045300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4022950-4023949 Glycine max
Glyma.05G045300 2.0kb upstream 2.0kb upstream 3865 true Chr05: 4023950-4027814 Glycine max
Glyma.05G045300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4025815-4027814 Glycine max
Glyma.05G045300 2.0kb downstream 2.0kb downstream 3865 true Chr05: 4021950-4025814 Glycine max
Glyma.05G045300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4021950-4023949 Glycine max
Glyma.05G045300 5.0kb upstream 5.0kb upstream 6865 true Chr05: 4023950-4030814 Glycine max
Glyma.05G045300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4025815-4030814 Glycine max
Glyma.05G045300 5.0kb downstream 5.0kb downstream 6865 true Chr05: 4018950-4025814 Glycine max
Glyma.05G045300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4018950-4023949 Glycine max
Glyma.05G045300 10.0kb upstream 10.0kb upstream 11865 true Chr05: 4023950-4035814 Glycine max
Glyma.05G045300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4025815-4035814 Glycine max
Glyma.05G045300 10.0kb downstream 10.0kb downstream 11865 true Chr05: 4013950-4025814 Glycine max
Glyma.05G045300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4013950-4023949 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302152 5265 Fabidae View MSA
124070974 5270 Rosid View MSA
123749783 5271 Pentapetalae View MSA
122795701 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.103226 0.0 0.405677 Low  
cufflinks 0.710692 0.0 2.54931    
cufflinks 29.9108 0.0 81.8187 High High
cufflinks 0.140872 0.0 0.547128 Low  
cufflinks 1.61991 0.0 5.34657    
cufflinks 0.515453 0.0 1.88289    
cufflinks 0.63973 0.0 2.30644    
cufflinks 0.463519 0.0 1.70456    
cufflinks 0.103435 0.0 0.406517 Low  
cufflinks 1.896       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.249        
cufflinks 0.692        
cufflinks 0.987       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.198        
cufflinks 0.082        
cufflinks 0.411        
cufflinks 0.621        
cufflinks 0.104        
cufflinks 0.058     Low Low
cufflinks 0.415        
cufflinks 0.331        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.146        
cufflinks 0.033     Low Low

0 Strain