Gene : Glyma.05G040200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR15217 - WILMS' TUMOR 1-ASSOCIATING PROTEIN Genomic Order:  402
Name:  ? Glyma.05G040200 Secondary Identifier:  ? PAC:30524967
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G040200 0.5kb upstream 0.5kb upstream 7962 true Chr05: 3581702-3589663 Glycine max
Glyma.05G040200 0.5kb upstream 0.5kb upstream 500 false Chr05: 3581702-3582201 Glycine max
Glyma.05G040200 0.5kb downstream 0.5kb downstream 7962 true Chr05: 3582202-3590163 Glycine max
Glyma.05G040200 0.5kb downstream 0.5kb downstream 500 false Chr05: 3589664-3590163 Glycine max
Glyma.05G040200 1.0kb upstream 1.0kb upstream 8462 true Chr05: 3581202-3589663 Glycine max
Glyma.05G040200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3581202-3582201 Glycine max
Glyma.05G040200 1.0kb downstream 1.0kb downstream 8462 true Chr05: 3582202-3590663 Glycine max
Glyma.05G040200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3589664-3590663 Glycine max
Glyma.05G040200 2.0kb upstream 2.0kb upstream 9462 true Chr05: 3580202-3589663 Glycine max
Glyma.05G040200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3580202-3582201 Glycine max
Glyma.05G040200 2.0kb downstream 2.0kb downstream 9462 true Chr05: 3582202-3591663 Glycine max
Glyma.05G040200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3589664-3591663 Glycine max
Glyma.05G040200 5.0kb upstream 5.0kb upstream 12462 true Chr05: 3577202-3589663 Glycine max
Glyma.05G040200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3577202-3582201 Glycine max
Glyma.05G040200 5.0kb downstream 5.0kb downstream 12462 true Chr05: 3582202-3594663 Glycine max
Glyma.05G040200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3589664-3594663 Glycine max
Glyma.05G040200 10.0kb upstream 10.0kb upstream 17462 true Chr05: 3572202-3589663 Glycine max
Glyma.05G040200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3572202-3582201 Glycine max
Glyma.05G040200 10.0kb downstream 10.0kb downstream 17462 true Chr05: 3582202-3599663 Glycine max
Glyma.05G040200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3589664-3599663 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310252 5265 Fabidae View MSA
124060684 5270 Rosid View MSA
123743181 5271 Pentapetalae View MSA
122795045 5272 Eudicot View MSA
122047600 5273 Angiosperm View MSA
123429059 5275 Viridiplantae View MSA
121346918 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.7165 0.0 14.9035    
cufflinks 5.02801 0.0 21.1828   High
cufflinks 5.36459 0.0 32.6582   High
cufflinks 3.66934 0.0 21.0713    
cufflinks 3.09156 0.0 9.7079    
cufflinks 3.20287 0.0 13.045    
cufflinks 4.06391 0.0 18.4216    
cufflinks 2.95637 0.0 12.3641   Low
cufflinks 3.63148 0.0 14.2851    
cufflinks 0.227       Low
cufflinks 0.314        
cufflinks 0.623       High
cufflinks 0.434        
cufflinks 0.452        
cufflinks 0.394        
cufflinks 0.465        
cufflinks 0.259       Low
cufflinks 0.557       High
cufflinks 0.66       High
cufflinks 0.442        
cufflinks 0.381        
cufflinks 0.449        
cufflinks 0.428        
cufflinks 0.39        
cufflinks 0.436        
cufflinks 0.314        

0 Strain