Gene : Glyma.05G040500 G. max Wm82.a2.v1
Defline:  (1 of 91) PF03195 - Protein of unknown function DUF260 (DUF260) Genomic Order:  405
Name:  ? Glyma.05G040500 Secondary Identifier:  ? PAC:30527368
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G040500 0.5kb upstream 0.5kb upstream 2908 true Chr05: 3625982-3628889 Glycine max
Glyma.05G040500 0.5kb upstream 0.5kb upstream 500 false Chr05: 3628390-3628889 Glycine max
Glyma.05G040500 0.5kb downstream 0.5kb downstream 2908 true Chr05: 3625482-3628389 Glycine max
Glyma.05G040500 0.5kb downstream 0.5kb downstream 500 false Chr05: 3625482-3625981 Glycine max
Glyma.05G040500 1.0kb upstream 1.0kb upstream 3408 true Chr05: 3625982-3629389 Glycine max
Glyma.05G040500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3628390-3629389 Glycine max
Glyma.05G040500 1.0kb downstream 1.0kb downstream 3408 true Chr05: 3624982-3628389 Glycine max
Glyma.05G040500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3624982-3625981 Glycine max
Glyma.05G040500 2.0kb upstream 2.0kb upstream 4408 true Chr05: 3625982-3630389 Glycine max
Glyma.05G040500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3628390-3630389 Glycine max
Glyma.05G040500 2.0kb downstream 2.0kb downstream 4408 true Chr05: 3623982-3628389 Glycine max
Glyma.05G040500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3623982-3625981 Glycine max
Glyma.05G040500 5.0kb upstream 5.0kb upstream 7408 true Chr05: 3625982-3633389 Glycine max
Glyma.05G040500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3628390-3633389 Glycine max
Glyma.05G040500 5.0kb downstream 5.0kb downstream 7408 true Chr05: 3620982-3628389 Glycine max
Glyma.05G040500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3620982-3625981 Glycine max
Glyma.05G040500 10.0kb upstream 10.0kb upstream 12408 true Chr05: 3625982-3638389 Glycine max
Glyma.05G040500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3628390-3638389 Glycine max
Glyma.05G040500 10.0kb downstream 10.0kb downstream 12408 true Chr05: 3615982-3628389 Glycine max
Glyma.05G040500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3615982-3625981 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313203 5265 Fabidae View MSA
124070294 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.93392 0.0 32.5149   High
cufflinks 0.115834 0.0 0.474279 Low  
cufflinks 0.23914 0.0 2.84789    
cufflinks 0.110825 0.0 0.444818 Low  
cufflinks 0.246599 0.0 0.960058 Low  
cufflinks 0.410456 0.0 2.75454    
cufflinks 0.0546458 0.0 0.230279 Low Low
cufflinks 0.111085 0.0 0.446349 Low  
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.069        
cufflinks 0.087     Low  
cufflinks 1.117       High
cufflinks 0.007     Low  
cufflinks 0.017     Low  
cufflinks 0.027     Low  
cufflinks 0.003     Low Low
cufflinks 0.003     Low Low
cufflinks 0.031     Low  
cufflinks 0.007     Low  

0 Strain