Gene : Glyma.05G061300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22604:SF123 - BCDNA.GH03377 Genomic Order:  613
Name:  ? Glyma.05G061300 Secondary Identifier:  ? PAC:30525707
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G061300 0.5kb upstream 0.5kb upstream 4974 true Chr05: 5734422-5739395 Glycine max
Glyma.05G061300 0.5kb upstream 0.5kb upstream 500 false Chr05: 5734422-5734921 Glycine max
Glyma.05G061300 0.5kb downstream 0.5kb downstream 4974 true Chr05: 5734922-5739895 Glycine max
Glyma.05G061300 0.5kb downstream 0.5kb downstream 500 false Chr05: 5739396-5739895 Glycine max
Glyma.05G061300 1.0kb upstream 1.0kb upstream 5474 true Chr05: 5733922-5739395 Glycine max
Glyma.05G061300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5733922-5734921 Glycine max
Glyma.05G061300 1.0kb downstream 1.0kb downstream 5474 true Chr05: 5734922-5740395 Glycine max
Glyma.05G061300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5739396-5740395 Glycine max
Glyma.05G061300 2.0kb upstream 2.0kb upstream 6474 true Chr05: 5732922-5739395 Glycine max
Glyma.05G061300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5732922-5734921 Glycine max
Glyma.05G061300 2.0kb downstream 2.0kb downstream 6474 true Chr05: 5734922-5741395 Glycine max
Glyma.05G061300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5739396-5741395 Glycine max
Glyma.05G061300 5.0kb upstream 5.0kb upstream 9474 true Chr05: 5729922-5739395 Glycine max
Glyma.05G061300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5729922-5734921 Glycine max
Glyma.05G061300 5.0kb downstream 5.0kb downstream 9474 true Chr05: 5734922-5744395 Glycine max
Glyma.05G061300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5739396-5744395 Glycine max
Glyma.05G061300 10.0kb upstream 10.0kb upstream 14474 true Chr05: 5724922-5739395 Glycine max
Glyma.05G061300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5724922-5734921 Glycine max
Glyma.05G061300 10.0kb downstream 10.0kb downstream 14474 true Chr05: 5734922-5749395 Glycine max
Glyma.05G061300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5739396-5749395 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040870 5273 Angiosperm View MSA
122308184 5265 Fabidae View MSA
124074719 5270 Rosid View MSA
123740762 5271 Pentapetalae View MSA
122793332 5272 Eudicot View MSA
121344130 5274 Embryophyte View MSA
123379980 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.75475 0.0 32.3137   High
cufflinks 7.39042 0.0 25.1506    
cufflinks 6.97223 0.0 24.0313    
cufflinks 7.23823 0.0 24.0675    
cufflinks 4.13765 0.0 16.5103   Low
cufflinks 5.83733 0.0 20.9201    
cufflinks 5.38122 0.0 23.0077    
cufflinks 7.30196 0.0 24.6619    
cufflinks 5.17067 0.0 18.8498    
cufflinks 1.698        
cufflinks 0.558       Low
cufflinks 1.438        
cufflinks 0.892        
cufflinks 0.978        
cufflinks 0.47       Low
cufflinks 2.128       High
cufflinks 0.592       Low
cufflinks 1.698        
cufflinks 1.626        
cufflinks 2.444       High
cufflinks 0.708        
cufflinks 2.195       High
cufflinks 2.052        
cufflinks 0.835        
cufflinks 2.311       High
cufflinks 0.771        

0 Strain