Gene : Glyma.05G062300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24078:SF280 - MYB TRANSCRIPTION FACTOR Genomic Order:  623
Name:  ? Glyma.05G062300 Secondary Identifier:  ? PAC:30526272
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G062300 0.5kb upstream 0.5kb upstream 5209 true Chr05: 5874594-5879802 Glycine max
Glyma.05G062300 0.5kb upstream 0.5kb upstream 500 false Chr05: 5879303-5879802 Glycine max
Glyma.05G062300 0.5kb downstream 0.5kb downstream 5209 true Chr05: 5874094-5879302 Glycine max
Glyma.05G062300 0.5kb downstream 0.5kb downstream 500 false Chr05: 5874094-5874593 Glycine max
Glyma.05G062300 1.0kb upstream 1.0kb upstream 5709 true Chr05: 5874594-5880302 Glycine max
Glyma.05G062300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5879303-5880302 Glycine max
Glyma.05G062300 1.0kb downstream 1.0kb downstream 5709 true Chr05: 5873594-5879302 Glycine max
Glyma.05G062300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5873594-5874593 Glycine max
Glyma.05G062300 2.0kb upstream 2.0kb upstream 6709 true Chr05: 5874594-5881302 Glycine max
Glyma.05G062300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5879303-5881302 Glycine max
Glyma.05G062300 2.0kb downstream 2.0kb downstream 6709 true Chr05: 5872594-5879302 Glycine max
Glyma.05G062300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5872594-5874593 Glycine max
Glyma.05G062300 5.0kb upstream 5.0kb upstream 9709 true Chr05: 5874594-5884302 Glycine max
Glyma.05G062300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5879303-5884302 Glycine max
Glyma.05G062300 5.0kb downstream 5.0kb downstream 9709 true Chr05: 5869594-5879302 Glycine max
Glyma.05G062300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5869594-5874593 Glycine max
Glyma.05G062300 10.0kb upstream 10.0kb upstream 14709 true Chr05: 5874594-5889302 Glycine max
Glyma.05G062300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5879303-5889302 Glycine max
Glyma.05G062300 10.0kb downstream 10.0kb downstream 14709 true Chr05: 5864594-5879302 Glycine max
Glyma.05G062300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5864594-5874593 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300391 5265 Fabidae View MSA
124065296 5270 Rosid View MSA
123744920 5271 Pentapetalae View MSA
122787760 5272 Eudicot View MSA
122050347 5273 Angiosperm View MSA
121350990 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.6092 0.0 85.7433 High  
cufflinks 28.9463 0.0 78.0499 High  
cufflinks 44.6903 0.0 124.34 High High
cufflinks 25.5545 0.0 68.5804 High  
cufflinks 27.3481 0.0 73.6918 High  
cufflinks 21.8763 0.0 58.4896   Low
cufflinks 29.7344 0.0 80.4068 High  
cufflinks 25.1834 0.0 67.5709 High  
cufflinks 30.9644 0.0 83.9063 High  
cufflinks 6.308        
cufflinks 18.747     High High
cufflinks 10.185     High  
cufflinks 4.166       Low
cufflinks 4.4       Low
cufflinks 13.425     High  
cufflinks 12.842     High  
cufflinks 4.628       Low
cufflinks 6.704        
cufflinks 10.061     High  
cufflinks 16.981     High High
cufflinks 12.663     High  
cufflinks 14.288     High  
cufflinks 9.669     High  
cufflinks 18.136     High High
cufflinks 13.969     High  
cufflinks 9.295     High  

0 Strain