Gene : Glyma.05G063100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR13994:SF9 - NUDIX HYDROLASE 8 Genomic Order:  631
Name:  ? Glyma.05G063100 Secondary Identifier:  ? PAC:30524932
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5381 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G063100 0.5kb upstream 0.5kb upstream 3512 true Chr05: 5996692-6000203 Glycine max
Glyma.05G063100 0.5kb upstream 0.5kb upstream 500 false Chr05: 5999704-6000203 Glycine max
Glyma.05G063100 0.5kb downstream 0.5kb downstream 3512 true Chr05: 5996192-5999703 Glycine max
Glyma.05G063100 0.5kb downstream 0.5kb downstream 500 false Chr05: 5996192-5996691 Glycine max
Glyma.05G063100 1.0kb upstream 1.0kb upstream 4012 true Chr05: 5996692-6000703 Glycine max
Glyma.05G063100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5999704-6000703 Glycine max
Glyma.05G063100 1.0kb downstream 1.0kb downstream 4012 true Chr05: 5995692-5999703 Glycine max
Glyma.05G063100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5995692-5996691 Glycine max
Glyma.05G063100 2.0kb upstream 2.0kb upstream 5012 true Chr05: 5996692-6001703 Glycine max
Glyma.05G063100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5999704-6001703 Glycine max
Glyma.05G063100 2.0kb downstream 2.0kb downstream 5012 true Chr05: 5994692-5999703 Glycine max
Glyma.05G063100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5994692-5996691 Glycine max
Glyma.05G063100 5.0kb upstream 5.0kb upstream 8012 true Chr05: 5996692-6004703 Glycine max
Glyma.05G063100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5999704-6004703 Glycine max
Glyma.05G063100 5.0kb downstream 5.0kb downstream 8012 true Chr05: 5991692-5999703 Glycine max
Glyma.05G063100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5991692-5996691 Glycine max
Glyma.05G063100 10.0kb upstream 10.0kb upstream 13012 true Chr05: 5996692-6009703 Glycine max
Glyma.05G063100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5999704-6009703 Glycine max
Glyma.05G063100 10.0kb downstream 10.0kb downstream 13012 true Chr05: 5986692-5999703 Glycine max
Glyma.05G063100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5986692-5996691 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122239441 5265 Fabidae Singleton cluster - no MSA
124073129 5270 Rosid View MSA
123744732 5271 Pentapetalae View MSA
122795674 5272 Eudicot View MSA
122049902 5273 Angiosperm View MSA
121347954 5274 Embryophyte View MSA
123428722 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.8961 0.0 67.1025   High
cufflinks 8.68572 0.0 35.7708    
cufflinks 16.7796 0.0 60.6327   High
cufflinks 11.6559 0.0 45.3719    
cufflinks 2.38024 0.0 12.3641   Low
cufflinks 5.46671 0.0 22.3744    
cufflinks 3.61245 0.0 16.9117    
cufflinks 5.92365 0.0 23.4954    
cufflinks 3.24112 0.0 15.8898    
cufflinks 4.635       High
cufflinks 0.065       Low
cufflinks 4.041       High
cufflinks 1.001        
cufflinks 0.345        
cufflinks 0.083       Low
cufflinks 1.522        
cufflinks 1.073        
cufflinks 3.165        
cufflinks 1.865        
cufflinks 1.948        
cufflinks 0.212       Low
cufflinks 2.158        
cufflinks 3.244        
cufflinks 0.125       Low
cufflinks 1.982        
cufflinks 0.66        

0 Strain