Gene : Glyma.05G063500 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  635
Name:  ? Glyma.05G063500 Secondary Identifier:  ? PAC:30523757
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G063500 0.5kb upstream 0.5kb upstream 1830 true Chr05: 6132703-6134532 Glycine max
Glyma.05G063500 0.5kb upstream 0.5kb upstream 500 false Chr05: 6134033-6134532 Glycine max
Glyma.05G063500 0.5kb downstream 0.5kb downstream 1830 true Chr05: 6132203-6134032 Glycine max
Glyma.05G063500 0.5kb downstream 0.5kb downstream 500 false Chr05: 6132203-6132702 Glycine max
Glyma.05G063500 1.0kb upstream 1.0kb upstream 2330 true Chr05: 6132703-6135032 Glycine max
Glyma.05G063500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 6134033-6135032 Glycine max
Glyma.05G063500 1.0kb downstream 1.0kb downstream 2330 true Chr05: 6131703-6134032 Glycine max
Glyma.05G063500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 6131703-6132702 Glycine max
Glyma.05G063500 2.0kb upstream 2.0kb upstream 3330 true Chr05: 6132703-6136032 Glycine max
Glyma.05G063500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 6134033-6136032 Glycine max
Glyma.05G063500 2.0kb downstream 2.0kb downstream 3330 true Chr05: 6130703-6134032 Glycine max
Glyma.05G063500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 6130703-6132702 Glycine max
Glyma.05G063500 5.0kb upstream 5.0kb upstream 6330 true Chr05: 6132703-6139032 Glycine max
Glyma.05G063500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 6134033-6139032 Glycine max
Glyma.05G063500 5.0kb downstream 5.0kb downstream 6330 true Chr05: 6127703-6134032 Glycine max
Glyma.05G063500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 6127703-6132702 Glycine max
Glyma.05G063500 10.0kb upstream 10.0kb upstream 11330 true Chr05: 6132703-6144032 Glycine max
Glyma.05G063500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 6134033-6144032 Glycine max
Glyma.05G063500 10.0kb downstream 10.0kb downstream 11330 true Chr05: 6122703-6134032 Glycine max
Glyma.05G063500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 6122703-6132702 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311424 5265 Fabidae View MSA
124063509 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.9518 0.0 66.5683 High High
cufflinks 7.13017 0.0 20.6338    
cufflinks 4.28811 0.0 13.414    
cufflinks 3.17013 0.0 10.2646   Low
cufflinks 12.5375 0.0 34.1362    
cufflinks 24.8038 0.0 66.1737 High High
cufflinks 4.32239 0.0 13.2936    
cufflinks 6.162 0.0 18.1309    
cufflinks 9.47741 0.0 26.4525    
cufflinks 19.667     High  
cufflinks 27.717     High  
cufflinks 24.224     High  
cufflinks 11.345     High  
cufflinks 5.621       Low
cufflinks 22.244     High  
cufflinks 37.527     High High
cufflinks 16.306     High  
cufflinks 33.473     High High
cufflinks 11.88     High  
cufflinks 23.415     High  
cufflinks 14.741     High  
cufflinks 21.096     High  
cufflinks 13.181     High  
cufflinks 44.805     High High
cufflinks 10.742     High Low
cufflinks 19.874     High  

0 Strain