Gene : Glyma.05G063900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11941:SF61 - PROTEIN ECH-5 Genomic Order:  639
Name:  ? Glyma.05G063900 Secondary Identifier:  ? PAC:30523822
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LEU-DEG2-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G063900 0.5kb upstream 0.5kb upstream 4326 true Chr05: 6208653-6212978 Glycine max
Glyma.05G063900 0.5kb upstream 0.5kb upstream 500 false Chr05: 6212479-6212978 Glycine max
Glyma.05G063900 0.5kb downstream 0.5kb downstream 4326 true Chr05: 6208153-6212478 Glycine max
Glyma.05G063900 0.5kb downstream 0.5kb downstream 500 false Chr05: 6208153-6208652 Glycine max
Glyma.05G063900 1.0kb upstream 1.0kb upstream 4826 true Chr05: 6208653-6213478 Glycine max
Glyma.05G063900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 6212479-6213478 Glycine max
Glyma.05G063900 1.0kb downstream 1.0kb downstream 4826 true Chr05: 6207653-6212478 Glycine max
Glyma.05G063900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 6207653-6208652 Glycine max
Glyma.05G063900 2.0kb upstream 2.0kb upstream 5826 true Chr05: 6208653-6214478 Glycine max
Glyma.05G063900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 6212479-6214478 Glycine max
Glyma.05G063900 2.0kb downstream 2.0kb downstream 5826 true Chr05: 6206653-6212478 Glycine max
Glyma.05G063900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 6206653-6208652 Glycine max
Glyma.05G063900 5.0kb upstream 5.0kb upstream 8826 true Chr05: 6208653-6217478 Glycine max
Glyma.05G063900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 6212479-6217478 Glycine max
Glyma.05G063900 5.0kb downstream 5.0kb downstream 8826 true Chr05: 6203653-6212478 Glycine max
Glyma.05G063900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 6203653-6208652 Glycine max
Glyma.05G063900 10.0kb upstream 10.0kb upstream 13826 true Chr05: 6208653-6222478 Glycine max
Glyma.05G063900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 6212479-6222478 Glycine max
Glyma.05G063900 10.0kb downstream 10.0kb downstream 13826 true Chr05: 6198653-6212478 Glycine max
Glyma.05G063900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 6198653-6208652 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299256 5265 Fabidae View MSA
124069005 5270 Rosid View MSA
123739015 5271 Pentapetalae View MSA
122790936 5272 Eudicot View MSA
122045797 5273 Angiosperm View MSA
121351751 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.92452 0.0 24.4562    
cufflinks 7.53132 0.0 20.8789    
cufflinks 8.24258 0.0 22.6308    
cufflinks 9.10311 0.0 24.8706    
cufflinks 8.30157 0.0 22.8757    
cufflinks 18.7048 0.0 49.9029   High
cufflinks 8.17499 0.0 22.5817    
cufflinks 8.10193 0.0 22.3171    
cufflinks 8.88949 0.0 24.3207    
cufflinks 3.814        
cufflinks 1.791       Low
cufflinks 4.785        
cufflinks 6.18       High
cufflinks 5.479       High
cufflinks 2.036       Low
cufflinks 3.959        
cufflinks 2.227       Low
cufflinks 4.066        
cufflinks 4.125        
cufflinks 4.03        
cufflinks 2.215       Low
cufflinks 4.554        
cufflinks 3.786        
cufflinks 2.723        
cufflinks 3.626        
cufflinks 3.274        

0 Strain