Gene : Glyma.05G060400 G. max Wm82.a2.v1
Defline:  (1 of 21) PF04784//PF14389 - Protein of unknown function, DUF547 (DUF547) // Leucine-zipper of ternary complex factor MIP1 (Lzipper-MIP1) Genomic Order:  604
Name:  ? Glyma.05G060400 Secondary Identifier:  ? PAC:30524792
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G060400 0.5kb upstream 0.5kb upstream 8251 true Chr05: 5637705-5645955 Glycine max
Glyma.05G060400 0.5kb upstream 0.5kb upstream 500 false Chr05: 5645456-5645955 Glycine max
Glyma.05G060400 0.5kb downstream 0.5kb downstream 8251 true Chr05: 5637205-5645455 Glycine max
Glyma.05G060400 0.5kb downstream 0.5kb downstream 500 false Chr05: 5637205-5637704 Glycine max
Glyma.05G060400 1.0kb upstream 1.0kb upstream 8751 true Chr05: 5637705-5646455 Glycine max
Glyma.05G060400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5645456-5646455 Glycine max
Glyma.05G060400 1.0kb downstream 1.0kb downstream 8751 true Chr05: 5636705-5645455 Glycine max
Glyma.05G060400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5636705-5637704 Glycine max
Glyma.05G060400 2.0kb upstream 2.0kb upstream 9751 true Chr05: 5637705-5647455 Glycine max
Glyma.05G060400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5645456-5647455 Glycine max
Glyma.05G060400 2.0kb downstream 2.0kb downstream 9751 true Chr05: 5635705-5645455 Glycine max
Glyma.05G060400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5635705-5637704 Glycine max
Glyma.05G060400 5.0kb upstream 5.0kb upstream 12751 true Chr05: 5637705-5650455 Glycine max
Glyma.05G060400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5645456-5650455 Glycine max
Glyma.05G060400 5.0kb downstream 5.0kb downstream 12751 true Chr05: 5632705-5645455 Glycine max
Glyma.05G060400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5632705-5637704 Glycine max
Glyma.05G060400 10.0kb upstream 10.0kb upstream 17751 true Chr05: 5637705-5655455 Glycine max
Glyma.05G060400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5645456-5655455 Glycine max
Glyma.05G060400 10.0kb downstream 10.0kb downstream 17751 true Chr05: 5627705-5645455 Glycine max
Glyma.05G060400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5627705-5637704 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311957 5265 Fabidae View MSA
124069316 5270 Rosid View MSA
123741227 5271 Pentapetalae View MSA
122791829 5272 Eudicot View MSA
122043072 5273 Angiosperm View MSA
121350596 5274 Embryophyte View MSA
123381815 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.389556 0.0 2.95119   Low
cufflinks 4.87693 0.0 21.0372   High
cufflinks 1.10004 0.0 6.79991    
cufflinks 2.43997 0.0 11.7336    
cufflinks 0.392482 0.0 3.00304   Low
cufflinks 0.812796 0.0 4.53976    
cufflinks 2.62664 0.0 12.1471    
cufflinks 1.32137 0.0 7.64792    
cufflinks 0.32276 0.0 2.47394   Low
cufflinks 0.141        
cufflinks 0.002     Low Low
cufflinks 0.237        
cufflinks 0.013     Low  
cufflinks 0.008     Low  
cufflinks 0.001     Low Low
cufflinks 0.217        
cufflinks 0.021     Low  
cufflinks 0.517       High
cufflinks 0.396       High
cufflinks 0.324        
cufflinks 0.006     Low  
cufflinks 0.35        
cufflinks 0.331        
cufflinks 0.002     Low Low
cufflinks 0.253        
cufflinks 0.008     Low  

0 Strain