Gene : Glyma.05G055900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31989:SF32 - NAC DOMAIN CONTAINING PROTEIN 26-RELATED Genomic Order:  559
Name:  ? Glyma.05G055900 Secondary Identifier:  ? PAC:30524371
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G055900 0.5kb upstream 0.5kb upstream 7151 true Chr05: 5069118-5076268 Glycine max
Glyma.05G055900 0.5kb upstream 0.5kb upstream 500 false Chr05: 5069118-5069617 Glycine max
Glyma.05G055900 0.5kb downstream 0.5kb downstream 7151 true Chr05: 5069618-5076768 Glycine max
Glyma.05G055900 0.5kb downstream 0.5kb downstream 500 false Chr05: 5076269-5076768 Glycine max
Glyma.05G055900 1.0kb upstream 1.0kb upstream 7651 true Chr05: 5068618-5076268 Glycine max
Glyma.05G055900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5068618-5069617 Glycine max
Glyma.05G055900 1.0kb downstream 1.0kb downstream 7651 true Chr05: 5069618-5077268 Glycine max
Glyma.05G055900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5076269-5077268 Glycine max
Glyma.05G055900 2.0kb upstream 2.0kb upstream 8651 true Chr05: 5067618-5076268 Glycine max
Glyma.05G055900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5067618-5069617 Glycine max
Glyma.05G055900 2.0kb downstream 2.0kb downstream 8651 true Chr05: 5069618-5078268 Glycine max
Glyma.05G055900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5076269-5078268 Glycine max
Glyma.05G055900 5.0kb upstream 5.0kb upstream 11651 true Chr05: 5064618-5076268 Glycine max
Glyma.05G055900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5064618-5069617 Glycine max
Glyma.05G055900 5.0kb downstream 5.0kb downstream 11651 true Chr05: 5069618-5081268 Glycine max
Glyma.05G055900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5076269-5081268 Glycine max
Glyma.05G055900 10.0kb upstream 10.0kb upstream 16651 true Chr05: 5059618-5076268 Glycine max
Glyma.05G055900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5059618-5069617 Glycine max
Glyma.05G055900 10.0kb downstream 10.0kb downstream 16651 true Chr05: 5069618-5086268 Glycine max
Glyma.05G055900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5076269-5086268 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045953 5273 Angiosperm View MSA
122304230 5265 Fabidae View MSA
124069915 5270 Rosid View MSA
123747601 5271 Pentapetalae View MSA
122796785 5272 Eudicot View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.529624 0.0 3.52699    
cufflinks 0.859057 0.0 5.34609    
cufflinks 0.508311 0.0 3.91775    
cufflinks 0.164303 0.0 1.15164 Low Low
cufflinks 1.09584 0.0 7.24856    
cufflinks 0.224795 0.0 1.58681 Low Low
cufflinks 0.259983 0.0 2.31735    
cufflinks 2.06444 0.0 11.1239   High
cufflinks 0.89734 0.0 5.79658    
cufflinks 0.309        
cufflinks 0.112        
cufflinks 0.113     Low  
cufflinks 0.412        
cufflinks 0.129        
cufflinks 0.007     Low Low
cufflinks 0.492        
cufflinks 0.156        
cufflinks 0.211        
cufflinks 0.165        
cufflinks 0.739       High
cufflinks 0.161        
cufflinks 0.575        
cufflinks 0.379        
cufflinks 0.152        
cufflinks 0.588       High
cufflinks 0.168        

0 Strain