Gene : Glyma.05G056400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10683:SF10 - TRANSALDOLASE-LIKE PROTEIN Genomic Order:  564
Name:  ? Glyma.05G056400 Secondary Identifier:  ? PAC:30523852
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax NONOXIPENT-PWY Glycine max pathologic  
Gmax PENTOSE-P-PWY Glycine max pathologic  
Gmax PWY-5723 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G056400 0.5kb upstream 0.5kb upstream 5337 true Chr05: 5160661-5165997 Glycine max
Glyma.05G056400 0.5kb upstream 0.5kb upstream 500 false Chr05: 5165498-5165997 Glycine max
Glyma.05G056400 0.5kb downstream 0.5kb downstream 5337 true Chr05: 5160161-5165497 Glycine max
Glyma.05G056400 0.5kb downstream 0.5kb downstream 500 false Chr05: 5160161-5160660 Glycine max
Glyma.05G056400 1.0kb upstream 1.0kb upstream 5837 true Chr05: 5160661-5166497 Glycine max
Glyma.05G056400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5165498-5166497 Glycine max
Glyma.05G056400 1.0kb downstream 1.0kb downstream 5837 true Chr05: 5159661-5165497 Glycine max
Glyma.05G056400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5159661-5160660 Glycine max
Glyma.05G056400 2.0kb upstream 2.0kb upstream 6837 true Chr05: 5160661-5167497 Glycine max
Glyma.05G056400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5165498-5167497 Glycine max
Glyma.05G056400 2.0kb downstream 2.0kb downstream 6837 true Chr05: 5158661-5165497 Glycine max
Glyma.05G056400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5158661-5160660 Glycine max
Glyma.05G056400 5.0kb upstream 5.0kb upstream 9837 true Chr05: 5160661-5170497 Glycine max
Glyma.05G056400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5165498-5170497 Glycine max
Glyma.05G056400 5.0kb downstream 5.0kb downstream 9837 true Chr05: 5155661-5165497 Glycine max
Glyma.05G056400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5155661-5160660 Glycine max
Glyma.05G056400 10.0kb upstream 10.0kb upstream 14837 true Chr05: 5160661-5175497 Glycine max
Glyma.05G056400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5165498-5175497 Glycine max
Glyma.05G056400 10.0kb downstream 10.0kb downstream 14837 true Chr05: 5150661-5165497 Glycine max
Glyma.05G056400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5150661-5160660 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305152 5265 Fabidae View MSA
124061321 5270 Rosid View MSA
123737527 5271 Pentapetalae View MSA
122787081 5272 Eudicot View MSA
122043979 5273 Angiosperm View MSA
121346789 5274 Embryophyte View MSA
123424119 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.35676 0.0 23.1118   Low
cufflinks 30.0027 0.0 80.8382 High  
cufflinks 6.95751 0.0 19.5624   Low
cufflinks 23.8447 0.0 63.7526 High  
cufflinks 37.4945 0.0 102.45 High  
cufflinks 29.4953 0.0 79.4415 High  
cufflinks 80.2274 0.0 239.002 High High
cufflinks 13.7397 0.0 36.8737    
cufflinks 22.7348 0.0 60.7453 High  
cufflinks 8.416     High  
cufflinks 0.83       Low
cufflinks 5.511        
cufflinks 17.498     High High
cufflinks 22.491     High High
cufflinks 0.596       Low
cufflinks 10.186     High  
cufflinks 2.41        
cufflinks 7.812     High  
cufflinks 12.413     High  
cufflinks 7.303     High  
cufflinks 1.78        
cufflinks 7.636     High  
cufflinks 10.327     High  
cufflinks 0.914       Low
cufflinks 9.045     High  
cufflinks 3.026        

0 Strain