Gene : Glyma.05G056700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14969:SF13 - AT30094P Genomic Order:  567
Name:  ? Glyma.05G056700 Secondary Identifier:  ? PAC:30525439
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRIGLSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G056700 0.5kb upstream 0.5kb upstream 5064 true Chr05: 5214553-5219616 Glycine max
Glyma.05G056700 0.5kb upstream 0.5kb upstream 500 false Chr05: 5214553-5215052 Glycine max
Glyma.05G056700 0.5kb downstream 0.5kb downstream 5064 true Chr05: 5215053-5220116 Glycine max
Glyma.05G056700 0.5kb downstream 0.5kb downstream 500 false Chr05: 5219617-5220116 Glycine max
Glyma.05G056700 1.0kb upstream 1.0kb upstream 5564 true Chr05: 5214053-5219616 Glycine max
Glyma.05G056700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5214053-5215052 Glycine max
Glyma.05G056700 1.0kb downstream 1.0kb downstream 5564 true Chr05: 5215053-5220616 Glycine max
Glyma.05G056700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5219617-5220616 Glycine max
Glyma.05G056700 2.0kb upstream 2.0kb upstream 6564 true Chr05: 5213053-5219616 Glycine max
Glyma.05G056700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5213053-5215052 Glycine max
Glyma.05G056700 2.0kb downstream 2.0kb downstream 6564 true Chr05: 5215053-5221616 Glycine max
Glyma.05G056700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5219617-5221616 Glycine max
Glyma.05G056700 5.0kb upstream 5.0kb upstream 9564 true Chr05: 5210053-5219616 Glycine max
Glyma.05G056700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5210053-5215052 Glycine max
Glyma.05G056700 5.0kb downstream 5.0kb downstream 9564 true Chr05: 5215053-5224616 Glycine max
Glyma.05G056700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5219617-5224616 Glycine max
Glyma.05G056700 10.0kb upstream 10.0kb upstream 14564 true Chr05: 5205053-5219616 Glycine max
Glyma.05G056700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5205053-5215052 Glycine max
Glyma.05G056700 10.0kb downstream 10.0kb downstream 14564 true Chr05: 5215053-5229616 Glycine max
Glyma.05G056700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5219617-5229616 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301882 5265 Fabidae View MSA
124068093 5270 Rosid View MSA
123737030 5271 Pentapetalae View MSA
122788421 5272 Eudicot View MSA
122043486 5273 Angiosperm View MSA
121349083 5274 Embryophyte View MSA
123381157 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.98929 0.0 26.5933   High
cufflinks 2.9443 0.0 14.8543   Low
cufflinks 4.06367 0.0 20.366    
cufflinks 5.03695 0.0 23.7044    
cufflinks 5.37814 0.0 26.5157    
cufflinks 2.6236 0.0 11.9421   Low
cufflinks 3.42865 0.0 16.5145    
cufflinks 6.33807 0.0 24.1981   High
cufflinks 4.92435 0.0 17.8914    
cufflinks 0.232        
cufflinks 0.252        
cufflinks 0.184       Low
cufflinks 0.231        
cufflinks 0.302        
cufflinks 0.272        
cufflinks 0.288        
cufflinks 0.15       Low
cufflinks 0.263        
cufflinks 0.258        
cufflinks 0.257        
cufflinks 0.159       Low
cufflinks 0.284        
cufflinks 0.326       High
cufflinks 0.265        
cufflinks 0.3        
cufflinks 0.177       Low

0 Strain