Gene : Glyma.05G082800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11709:SF113 - PECTINESTERASE LIKE PROTEIN-RELATED Genomic Order:  828
Name:  ? Glyma.05G082800 Secondary Identifier:  ? PAC:30527379
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5466 Glycine max pathologic  
Gmax PWY-6824 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G082800 0.5kb upstream 0.5kb upstream 1573 true Chr05: 13180805-13182377 Glycine max
Glyma.05G082800 0.5kb upstream 0.5kb upstream 500 false Chr05: 13180805-13181304 Glycine max
Glyma.05G082800 0.5kb downstream 0.5kb downstream 1573 true Chr05: 13181305-13182877 Glycine max
Glyma.05G082800 0.5kb downstream 0.5kb downstream 500 false Chr05: 13182378-13182877 Glycine max
Glyma.05G082800 1.0kb upstream 1.0kb upstream 2073 true Chr05: 13180305-13182377 Glycine max
Glyma.05G082800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 13180305-13181304 Glycine max
Glyma.05G082800 1.0kb downstream 1.0kb downstream 2073 true Chr05: 13181305-13183377 Glycine max
Glyma.05G082800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 13182378-13183377 Glycine max
Glyma.05G082800 2.0kb upstream 2.0kb upstream 3073 true Chr05: 13179305-13182377 Glycine max
Glyma.05G082800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 13179305-13181304 Glycine max
Glyma.05G082800 2.0kb downstream 2.0kb downstream 3073 true Chr05: 13181305-13184377 Glycine max
Glyma.05G082800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 13182378-13184377 Glycine max
Glyma.05G082800 5.0kb upstream 5.0kb upstream 6073 true Chr05: 13176305-13182377 Glycine max
Glyma.05G082800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 13176305-13181304 Glycine max
Glyma.05G082800 5.0kb downstream 5.0kb downstream 6073 true Chr05: 13181305-13187377 Glycine max
Glyma.05G082800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 13182378-13187377 Glycine max
Glyma.05G082800 10.0kb upstream 10.0kb upstream 11073 true Chr05: 13171305-13182377 Glycine max
Glyma.05G082800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 13171305-13181304 Glycine max
Glyma.05G082800 10.0kb downstream 10.0kb downstream 11073 true Chr05: 13181305-13192377 Glycine max
Glyma.05G082800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 13182378-13192377 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312718 5265 Fabidae View MSA
124074163 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0459357 0.0 0.21097 Low  
cufflinks 2.69367E-4 0.0 0.0077104 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0532496 0.0 0.240741 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low  
cufflinks 0.108        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low Low

0 Strain