Gene : Glyma.05G078500 G. max Wm82.a2.v1
Defline:  (1 of 202) KOG0987 - DNA helicase PIF1/RRM3 Genomic Order:  785
Name:  ? Glyma.05G078500 Secondary Identifier:  ? PAC:30523926
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G078500 0.5kb upstream 0.5kb upstream 2550 true Chr05: 10540489-10543038 Glycine max
Glyma.05G078500 0.5kb upstream 0.5kb upstream 500 false Chr05: 10542539-10543038 Glycine max
Glyma.05G078500 0.5kb downstream 0.5kb downstream 2550 true Chr05: 10539989-10542538 Glycine max
Glyma.05G078500 0.5kb downstream 0.5kb downstream 500 false Chr05: 10539989-10540488 Glycine max
Glyma.05G078500 1.0kb upstream 1.0kb upstream 3050 true Chr05: 10540489-10543538 Glycine max
Glyma.05G078500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 10542539-10543538 Glycine max
Glyma.05G078500 1.0kb downstream 1.0kb downstream 3050 true Chr05: 10539489-10542538 Glycine max
Glyma.05G078500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 10539489-10540488 Glycine max
Glyma.05G078500 2.0kb upstream 2.0kb upstream 4050 true Chr05: 10540489-10544538 Glycine max
Glyma.05G078500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 10542539-10544538 Glycine max
Glyma.05G078500 2.0kb downstream 2.0kb downstream 4050 true Chr05: 10538489-10542538 Glycine max
Glyma.05G078500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 10538489-10540488 Glycine max
Glyma.05G078500 5.0kb upstream 5.0kb upstream 7050 true Chr05: 10540489-10547538 Glycine max
Glyma.05G078500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 10542539-10547538 Glycine max
Glyma.05G078500 5.0kb downstream 5.0kb downstream 7050 true Chr05: 10535489-10542538 Glycine max
Glyma.05G078500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 10535489-10540488 Glycine max
Glyma.05G078500 10.0kb upstream 10.0kb upstream 12050 true Chr05: 10540489-10552538 Glycine max
Glyma.05G078500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 10542539-10552538 Glycine max
Glyma.05G078500 10.0kb downstream 10.0kb downstream 12050 true Chr05: 10530489-10542538 Glycine max
Glyma.05G078500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 10530489-10540488 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122315190 5265 Fabidae View MSA
124051325 5270 Rosid View MSA
123752824 5271 Pentapetalae View MSA
122797633 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.53227E-5 0.0 0.00181239 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain