Gene : Glyma.05G079100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32409:SF3 - MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED Genomic Order:  791
Name:  ? Glyma.05G079100 Secondary Identifier:  ? PAC:30524317
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G079100 0.5kb upstream 0.5kb upstream 5149 true Chr05: 10835753-10840901 Glycine max
Glyma.05G079100 0.5kb upstream 0.5kb upstream 500 false Chr05: 10835753-10836252 Glycine max
Glyma.05G079100 0.5kb downstream 0.5kb downstream 5149 true Chr05: 10836253-10841401 Glycine max
Glyma.05G079100 0.5kb downstream 0.5kb downstream 500 false Chr05: 10840902-10841401 Glycine max
Glyma.05G079100 1.0kb upstream 1.0kb upstream 5649 true Chr05: 10835253-10840901 Glycine max
Glyma.05G079100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 10835253-10836252 Glycine max
Glyma.05G079100 1.0kb downstream 1.0kb downstream 5649 true Chr05: 10836253-10841901 Glycine max
Glyma.05G079100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 10840902-10841901 Glycine max
Glyma.05G079100 2.0kb upstream 2.0kb upstream 6649 true Chr05: 10834253-10840901 Glycine max
Glyma.05G079100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 10834253-10836252 Glycine max
Glyma.05G079100 2.0kb downstream 2.0kb downstream 6649 true Chr05: 10836253-10842901 Glycine max
Glyma.05G079100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 10840902-10842901 Glycine max
Glyma.05G079100 5.0kb upstream 5.0kb upstream 9649 true Chr05: 10831253-10840901 Glycine max
Glyma.05G079100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 10831253-10836252 Glycine max
Glyma.05G079100 5.0kb downstream 5.0kb downstream 9649 true Chr05: 10836253-10845901 Glycine max
Glyma.05G079100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 10840902-10845901 Glycine max
Glyma.05G079100 10.0kb upstream 10.0kb upstream 14649 true Chr05: 10826253-10840901 Glycine max
Glyma.05G079100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 10826253-10836252 Glycine max
Glyma.05G079100 10.0kb downstream 10.0kb downstream 14649 true Chr05: 10836253-10850901 Glycine max
Glyma.05G079100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 10840902-10850901 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026369 5273 Angiosperm View MSA
122310130 5265 Fabidae View MSA
124065101 5270 Rosid View MSA
123751692 5271 Pentapetalae View MSA
122795762 5272 Eudicot View MSA
121344161 5274 Embryophyte View MSA
123425894 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.0133 0.0 112.074 High High
cufflinks 20.1932 0.0 71.8268 High  
cufflinks 13.3965 0.0 44.9275   Low
cufflinks 15.5636 0.0 57.1667    
cufflinks 27.6814 0.0 97.4517 High High
cufflinks 24.4553 0.0 85.1977 High  
cufflinks 15.9101 0.0 58.6452    
cufflinks 17.7928 0.0 64.4379    
cufflinks 22.0331 0.0 77.4665 High  
cufflinks 1.313        
cufflinks 1.368        
cufflinks 1.463        
cufflinks 3.295       High
cufflinks 3.971       High
cufflinks 0.867       Low
cufflinks 1.424        
cufflinks 1.409        
cufflinks 1.436        
cufflinks 1.766        
cufflinks 1.227        
cufflinks 1.073        
cufflinks 1.308        
cufflinks 1.976        
cufflinks 1.041        
cufflinks 1.273        
cufflinks 1.488        

0 Strain