Gene : Glyma.05G079900 G. max Wm82.a2.v1
Defline:  (1 of 1) 1.1.99.2 - L-2-hydroxyglutarate dehydrogenase / L-alpha-hydroxyglutarate dehydrogenase Genomic Order:  799
Name:  ? Glyma.05G079900 Secondary Identifier:  ? PAC:30525455
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G079900 0.5kb upstream 0.5kb upstream 5381 true Chr05: 11370352-11375732 Glycine max
Glyma.05G079900 0.5kb upstream 0.5kb upstream 500 false Chr05: 11375233-11375732 Glycine max
Glyma.05G079900 0.5kb downstream 0.5kb downstream 5381 true Chr05: 11369852-11375232 Glycine max
Glyma.05G079900 0.5kb downstream 0.5kb downstream 500 false Chr05: 11369852-11370351 Glycine max
Glyma.05G079900 1.0kb upstream 1.0kb upstream 5881 true Chr05: 11370352-11376232 Glycine max
Glyma.05G079900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 11375233-11376232 Glycine max
Glyma.05G079900 1.0kb downstream 1.0kb downstream 5881 true Chr05: 11369352-11375232 Glycine max
Glyma.05G079900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 11369352-11370351 Glycine max
Glyma.05G079900 2.0kb upstream 2.0kb upstream 6881 true Chr05: 11370352-11377232 Glycine max
Glyma.05G079900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 11375233-11377232 Glycine max
Glyma.05G079900 2.0kb downstream 2.0kb downstream 6881 true Chr05: 11368352-11375232 Glycine max
Glyma.05G079900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 11368352-11370351 Glycine max
Glyma.05G079900 5.0kb upstream 5.0kb upstream 9881 true Chr05: 11370352-11380232 Glycine max
Glyma.05G079900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 11375233-11380232 Glycine max
Glyma.05G079900 5.0kb downstream 5.0kb downstream 9881 true Chr05: 11365352-11375232 Glycine max
Glyma.05G079900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 11365352-11370351 Glycine max
Glyma.05G079900 10.0kb upstream 10.0kb upstream 14881 true Chr05: 11370352-11385232 Glycine max
Glyma.05G079900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 11375233-11385232 Glycine max
Glyma.05G079900 10.0kb downstream 10.0kb downstream 14881 true Chr05: 11360352-11375232 Glycine max
Glyma.05G079900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 11360352-11370351 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303922 5265 Fabidae View MSA
124061450 5270 Rosid View MSA
123738460 5271 Pentapetalae View MSA
122792382 5272 Eudicot View MSA
122042852 5273 Angiosperm View MSA
121347258 5274 Embryophyte View MSA
123427019 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.34901 0.0 12.0237    
cufflinks 3.6406 0.0 15.6621   High
cufflinks 1.74801 0.0 9.42379   Low
cufflinks 2.77848 0.0 12.8845    
cufflinks 1.76425 0.0 11.0433   Low
cufflinks 1.77279 0.0 6.75972   Low
cufflinks 3.02648 0.0 10.0729    
cufflinks 2.70866 0.0 12.4343    
cufflinks 2.44193 0.0 12.1118    
cufflinks 0.334        
cufflinks 0.091       Low
cufflinks 0.392        
cufflinks 0.295        
cufflinks 0.417        
cufflinks 0.285        
cufflinks 0.43        
cufflinks 0.113       Low
cufflinks 0.351        
cufflinks 0.595       High
cufflinks 0.453        
cufflinks 0.144       Low
cufflinks 0.496        
cufflinks 0.453        
cufflinks 0.112       Low
cufflinks 0.382        
cufflinks 0.201        

0 Strain