Gene : Glyma.05G073700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR28595:SF1 - 39S RIBOSOMAL PROTEIN L54, MITOCHONDRIAL Genomic Order:  737
Name:  ? Glyma.05G073700 Secondary Identifier:  ? PAC:30525190
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G073700 0.5kb upstream 0.5kb upstream 2590 true Chr05: 8369823-8372412 Glycine max
Glyma.05G073700 0.5kb upstream 0.5kb upstream 500 false Chr05: 8369823-8370322 Glycine max
Glyma.05G073700 0.5kb downstream 0.5kb downstream 2590 true Chr05: 8370323-8372912 Glycine max
Glyma.05G073700 0.5kb downstream 0.5kb downstream 500 false Chr05: 8372413-8372912 Glycine max
Glyma.05G073700 1.0kb upstream 1.0kb upstream 3090 true Chr05: 8369323-8372412 Glycine max
Glyma.05G073700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 8369323-8370322 Glycine max
Glyma.05G073700 1.0kb downstream 1.0kb downstream 3090 true Chr05: 8370323-8373412 Glycine max
Glyma.05G073700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 8372413-8373412 Glycine max
Glyma.05G073700 2.0kb upstream 2.0kb upstream 4090 true Chr05: 8368323-8372412 Glycine max
Glyma.05G073700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 8368323-8370322 Glycine max
Glyma.05G073700 2.0kb downstream 2.0kb downstream 4090 true Chr05: 8370323-8374412 Glycine max
Glyma.05G073700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 8372413-8374412 Glycine max
Glyma.05G073700 5.0kb upstream 5.0kb upstream 7090 true Chr05: 8365323-8372412 Glycine max
Glyma.05G073700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 8365323-8370322 Glycine max
Glyma.05G073700 5.0kb downstream 5.0kb downstream 7090 true Chr05: 8370323-8377412 Glycine max
Glyma.05G073700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 8372413-8377412 Glycine max
Glyma.05G073700 10.0kb upstream 10.0kb upstream 12090 true Chr05: 8360323-8372412 Glycine max
Glyma.05G073700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 8360323-8370322 Glycine max
Glyma.05G073700 10.0kb downstream 10.0kb downstream 12090 true Chr05: 8370323-8382412 Glycine max
Glyma.05G073700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 8372413-8382412 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305928 5265 Fabidae View MSA
124060646 5270 Rosid View MSA
123747142 5271 Pentapetalae View MSA
122795702 5272 Eudicot View MSA
122046066 5273 Angiosperm View MSA
121350806 5274 Embryophyte View MSA
123425089 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.08629 0.0 21.8143    
cufflinks 8.7297 0.0 26.1048    
cufflinks 1.62673 0.0 5.87319   Low
cufflinks 5.38244 0.0 17.2065    
cufflinks 7.97394 0.0 24.1187    
cufflinks 8.8275 0.0 26.3457    
cufflinks 7.15593 0.0 21.9769    
cufflinks 15.9182 0.0 44.2386   High
cufflinks 8.6985 0.0 25.9872    
cufflinks 2.569        
cufflinks 1.058       Low
cufflinks 1.738        
cufflinks 4.995       High
cufflinks 7.027     High High
cufflinks 1.919        
cufflinks 3.256        
cufflinks 2.18        
cufflinks 2.606        
cufflinks 6.089       High
cufflinks 2.763        
cufflinks 1.214       Low
cufflinks 3.146        
cufflinks 4.273        
cufflinks 1.421       Low
cufflinks 3.563        
cufflinks 2.127        

0 Strain