Gene : Glyma.05G077200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR21109:SF0 - 28S RIBOSOMAL PROTEIN S21, MITOCHONDRIAL Genomic Order:  772
Name:  ? Glyma.05G077200 Secondary Identifier:  ? PAC:30526918
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G077200 0.5kb upstream 0.5kb upstream 4582 true Chr05: 10004608-10009189 Glycine max
Glyma.05G077200 0.5kb upstream 0.5kb upstream 500 false Chr05: 10008690-10009189 Glycine max
Glyma.05G077200 0.5kb downstream 0.5kb downstream 4582 true Chr05: 10004108-10008689 Glycine max
Glyma.05G077200 0.5kb downstream 0.5kb downstream 500 false Chr05: 10004108-10004607 Glycine max
Glyma.05G077200 1.0kb upstream 1.0kb upstream 5082 true Chr05: 10004608-10009689 Glycine max
Glyma.05G077200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 10008690-10009689 Glycine max
Glyma.05G077200 1.0kb downstream 1.0kb downstream 5082 true Chr05: 10003608-10008689 Glycine max
Glyma.05G077200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 10003608-10004607 Glycine max
Glyma.05G077200 2.0kb upstream 2.0kb upstream 6082 true Chr05: 10004608-10010689 Glycine max
Glyma.05G077200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 10008690-10010689 Glycine max
Glyma.05G077200 2.0kb downstream 2.0kb downstream 6082 true Chr05: 10002608-10008689 Glycine max
Glyma.05G077200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 10002608-10004607 Glycine max
Glyma.05G077200 5.0kb upstream 5.0kb upstream 9082 true Chr05: 10004608-10013689 Glycine max
Glyma.05G077200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 10008690-10013689 Glycine max
Glyma.05G077200 5.0kb downstream 5.0kb downstream 9082 true Chr05: 9999608-10008689 Glycine max
Glyma.05G077200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 9999608-10004607 Glycine max
Glyma.05G077200 10.0kb upstream 10.0kb upstream 14082 true Chr05: 10004608-10018689 Glycine max
Glyma.05G077200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 10008690-10018689 Glycine max
Glyma.05G077200 10.0kb downstream 10.0kb downstream 14082 true Chr05: 9994608-10008689 Glycine max
Glyma.05G077200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 9994608-10004607 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027800 5273 Angiosperm View MSA
122310334 5265 Fabidae View MSA
124065865 5270 Rosid View MSA
123745699 5271 Pentapetalae View MSA
122793832 5272 Eudicot View MSA
121349916 5274 Embryophyte View MSA
123426860 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.0212 0.0 107.002 High High
cufflinks 23.246 0.0 62.3871 High  
cufflinks 64.372 0.0 175.76 High High
cufflinks 12.7341 0.0 35.5349    
cufflinks 13.4993 0.0 37.4107    
cufflinks 8.36072 0.0 24.4595   Low
cufflinks 11.4665 0.0 32.3265    
cufflinks 17.1205 0.0 46.5973    
cufflinks 15.2743 0.0 41.9086    
cufflinks 2.597        
cufflinks 12.246     High  
cufflinks 7.574     High  
cufflinks 0.626       Low
cufflinks 1.001       Low
cufflinks 8.269     High  
cufflinks 11.45     High  
cufflinks 2.486        
cufflinks 2.693        
cufflinks 3.481        
cufflinks 23.306     High High
cufflinks 9.538     High  
cufflinks 14.009     High  
cufflinks 6.213        
cufflinks 9.65     High  
cufflinks 15.213     High High
cufflinks 3.376        

0 Strain