Gene : Glyma.05G071000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22847//PTHR22847:SF473 - WD40 REPEAT PROTEIN Genomic Order:  710
Name:  ? Glyma.05G071000 Secondary Identifier:  ? PAC:30527361
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G071000 0.5kb upstream 0.5kb upstream 10143 true Chr05: 7654442-7664584 Glycine max
Glyma.05G071000 0.5kb upstream 0.5kb upstream 500 false Chr05: 7654442-7654941 Glycine max
Glyma.05G071000 0.5kb downstream 0.5kb downstream 10143 true Chr05: 7654942-7665084 Glycine max
Glyma.05G071000 0.5kb downstream 0.5kb downstream 500 false Chr05: 7664585-7665084 Glycine max
Glyma.05G071000 1.0kb upstream 1.0kb upstream 10643 true Chr05: 7653942-7664584 Glycine max
Glyma.05G071000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7653942-7654941 Glycine max
Glyma.05G071000 1.0kb downstream 1.0kb downstream 10643 true Chr05: 7654942-7665584 Glycine max
Glyma.05G071000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7664585-7665584 Glycine max
Glyma.05G071000 2.0kb upstream 2.0kb upstream 11643 true Chr05: 7652942-7664584 Glycine max
Glyma.05G071000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7652942-7654941 Glycine max
Glyma.05G071000 2.0kb downstream 2.0kb downstream 11643 true Chr05: 7654942-7666584 Glycine max
Glyma.05G071000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7664585-7666584 Glycine max
Glyma.05G071000 5.0kb upstream 5.0kb upstream 14643 true Chr05: 7649942-7664584 Glycine max
Glyma.05G071000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7649942-7654941 Glycine max
Glyma.05G071000 5.0kb downstream 5.0kb downstream 14643 true Chr05: 7654942-7669584 Glycine max
Glyma.05G071000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7664585-7669584 Glycine max
Glyma.05G071000 10.0kb upstream 10.0kb upstream 19643 true Chr05: 7644942-7664584 Glycine max
Glyma.05G071000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7644942-7654941 Glycine max
Glyma.05G071000 10.0kb downstream 10.0kb downstream 19643 true Chr05: 7654942-7674584 Glycine max
Glyma.05G071000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7664585-7674584 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315464 5265 Fabidae View MSA
124072313 5270 Rosid View MSA
123751820 5271 Pentapetalae View MSA
122789823 5272 Eudicot View MSA
122046787 5273 Angiosperm View MSA
123429146 5275 Viridiplantae View MSA
121350041 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0412096 0.0 0.169339 Low  
cufflinks 0.132958 0.0 0.520795 Low High
cufflinks 0.041008 0.0 0.168163 Low  
cufflinks 0.0478497 0.0 0.194959 Low  
cufflinks 0.052255 0.0 0.21221 Low  
cufflinks 0.0415744 0.0 0.170738 Low  
cufflinks 0.0682081 0.0 0.273933 Low  
cufflinks 0.114467 0.0 0.450498 Low High
cufflinks 0.0833855 0.0 0.332093 Low  
cufflinks 0.047     Low  
cufflinks 0.033     Low  
cufflinks 0.075     Low  
cufflinks 0.014     Low Low
cufflinks 0.026     Low Low
cufflinks 0.055        
cufflinks 0.052     Low  
cufflinks 0.041     Low  
cufflinks 0.095     Low High
cufflinks 0.097     Low High
cufflinks 0.063     Low  
cufflinks 0.021     Low Low
cufflinks 0.06     Low  
cufflinks 0.056     Low  
cufflinks 0.027     Low  
cufflinks 0.061     Low  
cufflinks 0.032     Low  

0 Strain