Gene : Glyma.05G072000 G. max Wm82.a2.v1
Defline:  (1 of 8) KOG1597 - Transcription initiation factor TFIIB Genomic Order:  720
Name:  ? Glyma.05G072000 Secondary Identifier:  ? PAC:30527107
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G072000 0.5kb upstream 0.5kb upstream 2694 true Chr05: 7937475-7940168 Glycine max
Glyma.05G072000 0.5kb upstream 0.5kb upstream 500 false Chr05: 7937475-7937974 Glycine max
Glyma.05G072000 0.5kb downstream 0.5kb downstream 2694 true Chr05: 7937975-7940668 Glycine max
Glyma.05G072000 0.5kb downstream 0.5kb downstream 500 false Chr05: 7940169-7940668 Glycine max
Glyma.05G072000 1.0kb upstream 1.0kb upstream 3194 true Chr05: 7936975-7940168 Glycine max
Glyma.05G072000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7936975-7937974 Glycine max
Glyma.05G072000 1.0kb downstream 1.0kb downstream 3194 true Chr05: 7937975-7941168 Glycine max
Glyma.05G072000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7940169-7941168 Glycine max
Glyma.05G072000 2.0kb upstream 2.0kb upstream 4194 true Chr05: 7935975-7940168 Glycine max
Glyma.05G072000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7935975-7937974 Glycine max
Glyma.05G072000 2.0kb downstream 2.0kb downstream 4194 true Chr05: 7937975-7942168 Glycine max
Glyma.05G072000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7940169-7942168 Glycine max
Glyma.05G072000 5.0kb upstream 5.0kb upstream 7194 true Chr05: 7932975-7940168 Glycine max
Glyma.05G072000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7932975-7937974 Glycine max
Glyma.05G072000 5.0kb downstream 5.0kb downstream 7194 true Chr05: 7937975-7945168 Glycine max
Glyma.05G072000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7940169-7945168 Glycine max
Glyma.05G072000 10.0kb upstream 10.0kb upstream 12194 true Chr05: 7927975-7940168 Glycine max
Glyma.05G072000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7927975-7937974 Glycine max
Glyma.05G072000 10.0kb downstream 10.0kb downstream 12194 true Chr05: 7937975-7950168 Glycine max
Glyma.05G072000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7940169-7950168 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312488 5265 Fabidae View MSA
124068856 5270 Rosid View MSA
123736384 5271 Pentapetalae View MSA
122797589 5272 Eudicot View MSA
122045994 5273 Angiosperm View MSA
121350308 5274 Embryophyte View MSA
123427568 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.190722 0.0 0.748628    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0832263 0.0 0.3376 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain