Gene : Glyma.05G095500 G. max Wm82.a2.v1

Defline:  (1 of 40) PF03763 - Remorin, C-terminal region (Remorin_C) Genomic Order:  955
Name:  ? Glyma.05G095500 Secondary Identifier:  ? PAC:30524400

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G095500 0.5kb upstream 0.5kb upstream 5817 true Chr05: 24741229-24747045 Glycine max
Glyma.05G095500 0.5kb upstream 0.5kb upstream 500 false Chr05: 24746546-24747045 Glycine max
Glyma.05G095500 0.5kb downstream 0.5kb downstream 5817 true Chr05: 24740729-24746545 Glycine max
Glyma.05G095500 0.5kb downstream 0.5kb downstream 500 false Chr05: 24740729-24741228 Glycine max
Glyma.05G095500 1.0kb upstream 1.0kb upstream 6317 true Chr05: 24741229-24747545 Glycine max
Glyma.05G095500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 24746546-24747545 Glycine max
Glyma.05G095500 1.0kb downstream 1.0kb downstream 6317 true Chr05: 24740229-24746545 Glycine max
Glyma.05G095500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 24740229-24741228 Glycine max
Glyma.05G095500 2.0kb upstream 2.0kb upstream 7317 true Chr05: 24741229-24748545 Glycine max
Glyma.05G095500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 24746546-24748545 Glycine max
Glyma.05G095500 2.0kb downstream 2.0kb downstream 7317 true Chr05: 24739229-24746545 Glycine max
Glyma.05G095500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 24739229-24741228 Glycine max
Glyma.05G095500 5.0kb upstream 5.0kb upstream 10317 true Chr05: 24741229-24751545 Glycine max
Glyma.05G095500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 24746546-24751545 Glycine max
Glyma.05G095500 5.0kb downstream 5.0kb downstream 10317 true Chr05: 24736229-24746545 Glycine max
Glyma.05G095500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 24736229-24741228 Glycine max
Glyma.05G095500 10.0kb upstream 10.0kb upstream 15317 true Chr05: 24741229-24756545 Glycine max
Glyma.05G095500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 24746546-24756545 Glycine max
Glyma.05G095500 10.0kb downstream 10.0kb downstream 15317 true Chr05: 24731229-24746545 Glycine max
Glyma.05G095500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 24731229-24741228 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254551 5265 Fabidae View MSA
124071235 5270 Rosid View MSA
123746814 5271 Pentapetalae View MSA
122772040 5272 Eudicot View MSA
122043924 5273 Angiosperm View MSA
121348920 5274 Embryophyte View MSA
123381079 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.222944 0.0 1.06534   Low
cufflinks 1.24007 0.0 6.39825    
cufflinks 0.166734 0.0 0.811971 Low Low
cufflinks 0.670175 0.0 3.00827    
cufflinks 5.57277 0.0 18.3771   High
cufflinks 1.78997 0.0 8.28694    
cufflinks 1.8698 0.0 8.61601    
cufflinks 4.75166 0.0 16.2256   High
cufflinks 1.14388 0.0 4.61884    
cufflinks 0.656       High
cufflinks 0.011     Low Low
cufflinks 0.073     Low  
cufflinks 0.155        
cufflinks 0.406       High
cufflinks 0.067        
cufflinks 0.332       High
cufflinks 0.043     Low  
cufflinks 0.167        
cufflinks 0.032     Low Low
cufflinks 0.111        
cufflinks 0.075        
cufflinks 0.134        
cufflinks 0.11        
cufflinks 0.072        
cufflinks 0.258        
cufflinks 0.037     Low  

0 Strain