Gene : Glyma.05G098800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24093:SF272 - CADMIUM/ZINC-TRANSPORTING ATPASE HMA1, CHLOROPLASTIC-RELATED Genomic Order:  988
Name:  ? Glyma.05G098800 Secondary Identifier:  ? PAC:30527402
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G098800 0.5kb upstream 0.5kb upstream 17835 true Chr05: 26246705-26264539 Glycine max
Glyma.05G098800 0.5kb upstream 0.5kb upstream 500 false Chr05: 26264040-26264539 Glycine max
Glyma.05G098800 0.5kb downstream 0.5kb downstream 17835 true Chr05: 26246205-26264039 Glycine max
Glyma.05G098800 0.5kb downstream 0.5kb downstream 500 false Chr05: 26246205-26246704 Glycine max
Glyma.05G098800 1.0kb upstream 1.0kb upstream 18335 true Chr05: 26246705-26265039 Glycine max
Glyma.05G098800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 26264040-26265039 Glycine max
Glyma.05G098800 1.0kb downstream 1.0kb downstream 18335 true Chr05: 26245705-26264039 Glycine max
Glyma.05G098800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 26245705-26246704 Glycine max
Glyma.05G098800 2.0kb upstream 2.0kb upstream 19335 true Chr05: 26246705-26266039 Glycine max
Glyma.05G098800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 26264040-26266039 Glycine max
Glyma.05G098800 2.0kb downstream 2.0kb downstream 19335 true Chr05: 26244705-26264039 Glycine max
Glyma.05G098800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 26244705-26246704 Glycine max
Glyma.05G098800 5.0kb upstream 5.0kb upstream 22335 true Chr05: 26246705-26269039 Glycine max
Glyma.05G098800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 26264040-26269039 Glycine max
Glyma.05G098800 5.0kb downstream 5.0kb downstream 22335 true Chr05: 26241705-26264039 Glycine max
Glyma.05G098800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 26241705-26246704 Glycine max
Glyma.05G098800 10.0kb upstream 10.0kb upstream 27335 true Chr05: 26246705-26274039 Glycine max
Glyma.05G098800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 26264040-26274039 Glycine max
Glyma.05G098800 10.0kb downstream 10.0kb downstream 27335 true Chr05: 26236705-26264039 Glycine max
Glyma.05G098800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 26236705-26246704 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300433 5265 Fabidae View MSA
124064324 5270 Rosid View MSA
123739287 5271 Pentapetalae View MSA
122793193 5272 Eudicot View MSA
122049253 5273 Angiosperm View MSA
121346683 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.0718 0.0 51.8981   High
cufflinks 11.7687 0.0 34.9974    
cufflinks 8.15438 0.0 24.4614    
cufflinks 11.1292 0.0 32.9863    
cufflinks 7.20677 0.0 21.8905    
cufflinks 5.89896 0.0 18.3881   Low
cufflinks 6.84587 0.0 20.8723    
cufflinks 8.20534 0.0 24.7269    
cufflinks 11.6035 0.0 34.5012    
cufflinks 1.321        
cufflinks 0.352       Low
cufflinks 1.921        
cufflinks 1.059        
cufflinks 0.962        
cufflinks 1.124        
cufflinks 1.952        
cufflinks 1.1        
cufflinks 2.158        
cufflinks 2.058        
cufflinks 2.819       High
cufflinks 0.445       Low
cufflinks 2.818       High
cufflinks 2.478        
cufflinks 0.423       Low
cufflinks 1.978        
cufflinks 1.026        

0 Strain