Gene : Glyma.05G091800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31580:SF3 - FILAMENT-LIKE PLANT PROTEIN 7 Genomic Order:  918
Name:  ? Glyma.05G091800 Secondary Identifier:  ? PAC:30525021
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G091800 0.5kb upstream 0.5kb upstream 7143 true Chr05: 22212747-22219889 Glycine max
Glyma.05G091800 0.5kb upstream 0.5kb upstream 500 false Chr05: 22212747-22213246 Glycine max
Glyma.05G091800 0.5kb downstream 0.5kb downstream 7143 true Chr05: 22213247-22220389 Glycine max
Glyma.05G091800 0.5kb downstream 0.5kb downstream 500 false Chr05: 22219890-22220389 Glycine max
Glyma.05G091800 1.0kb upstream 1.0kb upstream 7643 true Chr05: 22212247-22219889 Glycine max
Glyma.05G091800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 22212247-22213246 Glycine max
Glyma.05G091800 1.0kb downstream 1.0kb downstream 7643 true Chr05: 22213247-22220889 Glycine max
Glyma.05G091800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 22219890-22220889 Glycine max
Glyma.05G091800 2.0kb upstream 2.0kb upstream 8643 true Chr05: 22211247-22219889 Glycine max
Glyma.05G091800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 22211247-22213246 Glycine max
Glyma.05G091800 2.0kb downstream 2.0kb downstream 8643 true Chr05: 22213247-22221889 Glycine max
Glyma.05G091800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 22219890-22221889 Glycine max
Glyma.05G091800 5.0kb upstream 5.0kb upstream 11643 true Chr05: 22208247-22219889 Glycine max
Glyma.05G091800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 22208247-22213246 Glycine max
Glyma.05G091800 5.0kb downstream 5.0kb downstream 11643 true Chr05: 22213247-22224889 Glycine max
Glyma.05G091800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 22219890-22224889 Glycine max
Glyma.05G091800 10.0kb upstream 10.0kb upstream 16643 true Chr05: 22203247-22219889 Glycine max
Glyma.05G091800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 22203247-22213246 Glycine max
Glyma.05G091800 10.0kb downstream 10.0kb downstream 16643 true Chr05: 22213247-22229889 Glycine max
Glyma.05G091800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 22219890-22229889 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308504 5265 Fabidae View MSA
124061123 5270 Rosid View MSA
123744650 5271 Pentapetalae View MSA
122797725 5272 Eudicot View MSA
122048583 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.995693 0.0 4.64607    
cufflinks 3.30897 0.0 14.4585   High
cufflinks 0.665945 0.0 3.64921   Low
cufflinks 1.74048 0.0 7.91915    
cufflinks 1.95327 0.0 9.35686    
cufflinks 0.863809 0.0 4.1438    
cufflinks 2.40107 0.0 9.63557    
cufflinks 5.27702 0.0 18.8888   High
cufflinks 0.893114 0.0 4.29741    
cufflinks 0.73       High
cufflinks 0.019     Low Low
cufflinks 0.168        
cufflinks 0.409        
cufflinks 0.566       High
cufflinks 0.025     Low Low
cufflinks 0.179        
cufflinks 0.132        
cufflinks 0.343        
cufflinks 0.816       High
cufflinks 0.139        
cufflinks 0.039     Low Low
cufflinks 0.164        
cufflinks 0.157        
cufflinks 0.014     Low Low
cufflinks 0.194        
cufflinks 0.08        

0 Strain