Gene : Glyma.05G092300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15184:SF3 - ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL Genomic Order:  923
Name:  ? Glyma.05G092300 Secondary Identifier:  ? PAC:30526704
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6126 Glycine max pathologic  
Gmax PWY-7219 Glycine max pathologic  
Gmax PWY-7229 Glycine max pathologic  
Gmax PWY-841 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G092300 0.5kb upstream 0.5kb upstream 2057 true Chr05: 22254588-22256644 Glycine max
Glyma.05G092300 0.5kb upstream 0.5kb upstream 500 false Chr05: 22256145-22256644 Glycine max
Glyma.05G092300 0.5kb downstream 0.5kb downstream 2057 true Chr05: 22254088-22256144 Glycine max
Glyma.05G092300 0.5kb downstream 0.5kb downstream 500 false Chr05: 22254088-22254587 Glycine max
Glyma.05G092300 1.0kb upstream 1.0kb upstream 2557 true Chr05: 22254588-22257144 Glycine max
Glyma.05G092300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 22256145-22257144 Glycine max
Glyma.05G092300 1.0kb downstream 1.0kb downstream 2557 true Chr05: 22253588-22256144 Glycine max
Glyma.05G092300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 22253588-22254587 Glycine max
Glyma.05G092300 2.0kb upstream 2.0kb upstream 3557 true Chr05: 22254588-22258144 Glycine max
Glyma.05G092300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 22256145-22258144 Glycine max
Glyma.05G092300 2.0kb downstream 2.0kb downstream 3557 true Chr05: 22252588-22256144 Glycine max
Glyma.05G092300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 22252588-22254587 Glycine max
Glyma.05G092300 5.0kb upstream 5.0kb upstream 6557 true Chr05: 22254588-22261144 Glycine max
Glyma.05G092300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 22256145-22261144 Glycine max
Glyma.05G092300 5.0kb downstream 5.0kb downstream 6557 true Chr05: 22249588-22256144 Glycine max
Glyma.05G092300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 22249588-22254587 Glycine max
Glyma.05G092300 10.0kb upstream 10.0kb upstream 11557 true Chr05: 22254588-22266144 Glycine max
Glyma.05G092300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 22256145-22266144 Glycine max
Glyma.05G092300 10.0kb downstream 10.0kb downstream 11557 true Chr05: 22244588-22256144 Glycine max
Glyma.05G092300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 22244588-22254587 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298762 5265 Fabidae View MSA
124064158 5270 Rosid View MSA
123753752 5271 Pentapetalae View MSA
122797462 5272 Eudicot View MSA
122051574 5273 Angiosperm View MSA
123429126 5275 Viridiplantae View MSA
121351571 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.64472 0.0 6.04568   Low
cufflinks 2.25341 0.0 8.13267    
cufflinks 9.16928 0.0 28.4131    
cufflinks 59.8614 0.0 159.795 High High
cufflinks 4.05335 0.0 13.9167    
cufflinks 6.11327 0.0 19.9928    
cufflinks 10.3286 0.0 31.4187    
cufflinks 3.32415 0.0 11.668    
cufflinks 3.45429 0.0 12.0625    
cufflinks 5.273       High
cufflinks 2.797        
cufflinks 1.635        
cufflinks 3.091        
cufflinks 4.738       High
cufflinks 1.16        
cufflinks 0.668       Low
cufflinks 3.741       High
cufflinks 1.003        
cufflinks 3.042        
cufflinks 0.787       Low
cufflinks 1.305        
cufflinks 0.908        
cufflinks 2.057        
cufflinks 2.005        
cufflinks 0.809       Low
cufflinks 1.281        

0 Strain