Gene : Glyma.05G087600 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR12460 - CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN Genomic Order:  876
Name:  ? Glyma.05G087600 Secondary Identifier:  ? PAC:30524935
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G087600 0.5kb upstream 0.5kb upstream 11212 true Chr05: 17916444-17927655 Glycine max
Glyma.05G087600 0.5kb upstream 0.5kb upstream 500 false Chr05: 17916444-17916943 Glycine max
Glyma.05G087600 0.5kb downstream 0.5kb downstream 11212 true Chr05: 17916944-17928155 Glycine max
Glyma.05G087600 0.5kb downstream 0.5kb downstream 500 false Chr05: 17927656-17928155 Glycine max
Glyma.05G087600 1.0kb upstream 1.0kb upstream 11712 true Chr05: 17915944-17927655 Glycine max
Glyma.05G087600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 17915944-17916943 Glycine max
Glyma.05G087600 1.0kb downstream 1.0kb downstream 11712 true Chr05: 17916944-17928655 Glycine max
Glyma.05G087600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 17927656-17928655 Glycine max
Glyma.05G087600 2.0kb upstream 2.0kb upstream 12712 true Chr05: 17914944-17927655 Glycine max
Glyma.05G087600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 17914944-17916943 Glycine max
Glyma.05G087600 2.0kb downstream 2.0kb downstream 12712 true Chr05: 17916944-17929655 Glycine max
Glyma.05G087600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 17927656-17929655 Glycine max
Glyma.05G087600 5.0kb upstream 5.0kb upstream 15712 true Chr05: 17911944-17927655 Glycine max
Glyma.05G087600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 17911944-17916943 Glycine max
Glyma.05G087600 5.0kb downstream 5.0kb downstream 15712 true Chr05: 17916944-17932655 Glycine max
Glyma.05G087600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 17927656-17932655 Glycine max
Glyma.05G087600 10.0kb upstream 10.0kb upstream 20712 true Chr05: 17906944-17927655 Glycine max
Glyma.05G087600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 17906944-17916943 Glycine max
Glyma.05G087600 10.0kb downstream 10.0kb downstream 20712 true Chr05: 17916944-17937655 Glycine max
Glyma.05G087600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 17927656-17937655 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302415 5265 Fabidae View MSA
124070749 5270 Rosid View MSA
123742286 5271 Pentapetalae View MSA
122795416 5272 Eudicot View MSA
122049571 5273 Angiosperm View MSA
123428880 5275 Viridiplantae View MSA
121348039 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.03556 0.0 33.4967   High
cufflinks 7.01132 0.0 27.6185    
cufflinks 6.90638 0.0 26.7839    
cufflinks 7.16655 0.0 24.6175    
cufflinks 6.25343 0.0 25.4197    
cufflinks 5.34313 0.0 19.7892   Low
cufflinks 9.61243 0.0 35.013   High
cufflinks 8.02438 0.0 29.7947    
cufflinks 6.68753 0.0 25.7359    
cufflinks 0.801        
cufflinks 0.795        
cufflinks 0.789        
cufflinks 0.722       Low
cufflinks 0.817        
cufflinks 0.937       High
cufflinks 0.767        
cufflinks 0.709       Low
cufflinks 0.81        
cufflinks 1.08       High
cufflinks 0.754        
cufflinks 0.775        
cufflinks 0.848        
cufflinks 1.03       High
cufflinks 0.797        
cufflinks 0.78        
cufflinks 0.776        

0 Strain