Gene : Glyma.05G089100 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11669:SF1 - REPLICATION FACTOR C SUBUNIT 3 Genomic Order:  891
Name:  ? Glyma.05G089100 Secondary Identifier:  ? PAC:30527411
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G089100 0.5kb upstream 0.5kb upstream 4975 true Chr05: 19451858-19456832 Glycine max
Glyma.05G089100 0.5kb upstream 0.5kb upstream 500 false Chr05: 19456333-19456832 Glycine max
Glyma.05G089100 0.5kb downstream 0.5kb downstream 4975 true Chr05: 19451358-19456332 Glycine max
Glyma.05G089100 0.5kb downstream 0.5kb downstream 500 false Chr05: 19451358-19451857 Glycine max
Glyma.05G089100 1.0kb upstream 1.0kb upstream 5475 true Chr05: 19451858-19457332 Glycine max
Glyma.05G089100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 19456333-19457332 Glycine max
Glyma.05G089100 1.0kb downstream 1.0kb downstream 5475 true Chr05: 19450858-19456332 Glycine max
Glyma.05G089100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 19450858-19451857 Glycine max
Glyma.05G089100 2.0kb upstream 2.0kb upstream 6475 true Chr05: 19451858-19458332 Glycine max
Glyma.05G089100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 19456333-19458332 Glycine max
Glyma.05G089100 2.0kb downstream 2.0kb downstream 6475 true Chr05: 19449858-19456332 Glycine max
Glyma.05G089100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 19449858-19451857 Glycine max
Glyma.05G089100 5.0kb upstream 5.0kb upstream 9475 true Chr05: 19451858-19461332 Glycine max
Glyma.05G089100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 19456333-19461332 Glycine max
Glyma.05G089100 5.0kb downstream 5.0kb downstream 9475 true Chr05: 19446858-19456332 Glycine max
Glyma.05G089100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 19446858-19451857 Glycine max
Glyma.05G089100 10.0kb upstream 10.0kb upstream 14475 true Chr05: 19451858-19466332 Glycine max
Glyma.05G089100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 19456333-19466332 Glycine max
Glyma.05G089100 10.0kb downstream 10.0kb downstream 14475 true Chr05: 19441858-19456332 Glycine max
Glyma.05G089100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 19441858-19451857 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313460 5265 Fabidae View MSA
124061589 5270 Rosid View MSA
123739027 5271 Pentapetalae View MSA
122788068 5272 Eudicot View MSA
122043390 5273 Angiosperm View MSA
121345700 5274 Embryophyte View MSA
123424767 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.71211 0.0 15.4321   Low
cufflinks 11.8699 0.0 42.3074   High
cufflinks 4.23726 0.0 16.6656    
cufflinks 3.97919 0.0 16.026   Low
cufflinks 6.06295 0.0 21.6296    
cufflinks 6.35793 0.0 22.3736    
cufflinks 5.31685 0.0 19.7729    
cufflinks 6.18655 0.0 21.8329    
cufflinks 7.37303 0.0 24.9211    
cufflinks 1.199        
cufflinks 0.564       Low
cufflinks 0.856        
cufflinks 1.954       High
cufflinks 1.933       High
cufflinks 0.964        
cufflinks 1.017        
cufflinks 0.716        
cufflinks 0.816        
cufflinks 1.913       High
cufflinks 0.855        
cufflinks 0.72        
cufflinks 0.941        
cufflinks 1.559       High
cufflinks 0.783        
cufflinks 0.923        
cufflinks 0.951        

0 Strain