Gene : Glyma.05G089300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12124:SF47 - EXOSOME COMPONENT 10 Genomic Order:  893
Name:  ? Glyma.05G089300 Secondary Identifier:  ? PAC:30525905
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G089300 0.5kb upstream 0.5kb upstream 23923 true Chr05: 19640622-19664544 Glycine max
Glyma.05G089300 0.5kb upstream 0.5kb upstream 500 false Chr05: 19664045-19664544 Glycine max
Glyma.05G089300 0.5kb downstream 0.5kb downstream 23923 true Chr05: 19640122-19664044 Glycine max
Glyma.05G089300 0.5kb downstream 0.5kb downstream 500 false Chr05: 19640122-19640621 Glycine max
Glyma.05G089300 1.0kb upstream 1.0kb upstream 24423 true Chr05: 19640622-19665044 Glycine max
Glyma.05G089300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 19664045-19665044 Glycine max
Glyma.05G089300 1.0kb downstream 1.0kb downstream 24423 true Chr05: 19639622-19664044 Glycine max
Glyma.05G089300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 19639622-19640621 Glycine max
Glyma.05G089300 2.0kb upstream 2.0kb upstream 25423 true Chr05: 19640622-19666044 Glycine max
Glyma.05G089300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 19664045-19666044 Glycine max
Glyma.05G089300 2.0kb downstream 2.0kb downstream 25423 true Chr05: 19638622-19664044 Glycine max
Glyma.05G089300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 19638622-19640621 Glycine max
Glyma.05G089300 5.0kb upstream 5.0kb upstream 28423 true Chr05: 19640622-19669044 Glycine max
Glyma.05G089300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 19664045-19669044 Glycine max
Glyma.05G089300 5.0kb downstream 5.0kb downstream 28423 true Chr05: 19635622-19664044 Glycine max
Glyma.05G089300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 19635622-19640621 Glycine max
Glyma.05G089300 10.0kb upstream 10.0kb upstream 33423 true Chr05: 19640622-19674044 Glycine max
Glyma.05G089300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 19664045-19674044 Glycine max
Glyma.05G089300 10.0kb downstream 10.0kb downstream 33423 true Chr05: 19630622-19664044 Glycine max
Glyma.05G089300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 19630622-19640621 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306457 5265 Fabidae View MSA
124068791 5270 Rosid View MSA
123751361 5271 Pentapetalae View MSA
122791739 5272 Eudicot View MSA
122045383 5273 Angiosperm View MSA
121347466 5274 Embryophyte View MSA
123428856 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.90879 0.0 24.0301    
cufflinks 6.28385 0.0 25.5822    
cufflinks 5.50301 0.0 22.7521    
cufflinks 5.32005 0.0 21.9897    
cufflinks 4.82368 0.0 20.2086    
cufflinks 3.41502 0.0 15.6568   Low
cufflinks 5.82348 0.0 24.0239    
cufflinks 5.87746 0.0 24.0016    
cufflinks 4.75258 0.0 19.9321    
cufflinks 0.256        
cufflinks 0.272        
cufflinks 0.302        
cufflinks 0.24       Low
cufflinks 0.244       Low
cufflinks 0.29        
cufflinks 0.297        
cufflinks 0.262        
cufflinks 0.303        
cufflinks 0.371       High
cufflinks 0.262        
cufflinks 0.301        
cufflinks 0.293        
cufflinks 0.296        
cufflinks 0.291        
cufflinks 0.27        
cufflinks 0.328       High

0 Strain