Gene : Glyma.05G087100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12821 - BYSTIN Genomic Order:  871
Name:  ? Glyma.05G087100 Secondary Identifier:  ? PAC:30524701
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G087100 0.5kb upstream 0.5kb upstream 8384 true Chr05: 17318817-17327200 Glycine max
Glyma.05G087100 0.5kb upstream 0.5kb upstream 500 false Chr05: 17318817-17319316 Glycine max
Glyma.05G087100 0.5kb downstream 0.5kb downstream 8384 true Chr05: 17319317-17327700 Glycine max
Glyma.05G087100 0.5kb downstream 0.5kb downstream 500 false Chr05: 17327201-17327700 Glycine max
Glyma.05G087100 1.0kb upstream 1.0kb upstream 8884 true Chr05: 17318317-17327200 Glycine max
Glyma.05G087100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 17318317-17319316 Glycine max
Glyma.05G087100 1.0kb downstream 1.0kb downstream 8884 true Chr05: 17319317-17328200 Glycine max
Glyma.05G087100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 17327201-17328200 Glycine max
Glyma.05G087100 2.0kb upstream 2.0kb upstream 9884 true Chr05: 17317317-17327200 Glycine max
Glyma.05G087100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 17317317-17319316 Glycine max
Glyma.05G087100 2.0kb downstream 2.0kb downstream 9884 true Chr05: 17319317-17329200 Glycine max
Glyma.05G087100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 17327201-17329200 Glycine max
Glyma.05G087100 5.0kb upstream 5.0kb upstream 12884 true Chr05: 17314317-17327200 Glycine max
Glyma.05G087100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 17314317-17319316 Glycine max
Glyma.05G087100 5.0kb downstream 5.0kb downstream 12884 true Chr05: 17319317-17332200 Glycine max
Glyma.05G087100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 17327201-17332200 Glycine max
Glyma.05G087100 10.0kb upstream 10.0kb upstream 17884 true Chr05: 17309317-17327200 Glycine max
Glyma.05G087100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 17309317-17319316 Glycine max
Glyma.05G087100 10.0kb downstream 10.0kb downstream 17884 true Chr05: 17319317-17337200 Glycine max
Glyma.05G087100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 17327201-17337200 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305640 5265 Fabidae View MSA
124069575 5270 Rosid View MSA
123753167 5271 Pentapetalae View MSA
122797697 5272 Eudicot View MSA
122048686 5273 Angiosperm View MSA
121348351 5274 Embryophyte View MSA
123425728 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5496 0.0 45.5245   High
cufflinks 11.5066 0.0 41.1313    
cufflinks 6.42806 0.0 25.3551   Low
cufflinks 8.13727 0.0 30.7297    
cufflinks 12.4567 0.0 44.7319   High
cufflinks 7.10102 0.0 27.2725   Low
cufflinks 11.9912 0.0 42.4439    
cufflinks 9.26342 0.0 34.0812    
cufflinks 9.6778 0.0 36.8067    
cufflinks 0.391        
cufflinks 0.151       Low
cufflinks 0.656        
cufflinks 1.072       High
cufflinks 1.451       High
cufflinks 0.246        
cufflinks 0.458        
cufflinks 0.321        
cufflinks 0.597        
cufflinks 0.795       High
cufflinks 0.336        
cufflinks 0.241        
cufflinks 0.357        
cufflinks 0.56        
cufflinks 0.194       Low
cufflinks 0.412        
cufflinks 0.352        

0 Strain