Gene : Glyma.05G112600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10044:SF133 - MND1-INTERACTING PROTEIN 1 Genomic Order:  1126
Name:  ? Glyma.05G112600 Secondary Identifier:  ? PAC:30525779
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G112600 0.5kb upstream 0.5kb upstream 7721 true Chr05: 29929262-29936982 Glycine max
Glyma.05G112600 0.5kb upstream 0.5kb upstream 500 false Chr05: 29929262-29929761 Glycine max
Glyma.05G112600 0.5kb downstream 0.5kb downstream 7721 true Chr05: 29929762-29937482 Glycine max
Glyma.05G112600 0.5kb downstream 0.5kb downstream 500 false Chr05: 29936983-29937482 Glycine max
Glyma.05G112600 1.0kb upstream 1.0kb upstream 8221 true Chr05: 29928762-29936982 Glycine max
Glyma.05G112600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 29928762-29929761 Glycine max
Glyma.05G112600 1.0kb downstream 1.0kb downstream 8221 true Chr05: 29929762-29937982 Glycine max
Glyma.05G112600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 29936983-29937982 Glycine max
Glyma.05G112600 2.0kb upstream 2.0kb upstream 9221 true Chr05: 29927762-29936982 Glycine max
Glyma.05G112600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 29927762-29929761 Glycine max
Glyma.05G112600 2.0kb downstream 2.0kb downstream 9221 true Chr05: 29929762-29938982 Glycine max
Glyma.05G112600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 29936983-29938982 Glycine max
Glyma.05G112600 5.0kb upstream 5.0kb upstream 12221 true Chr05: 29924762-29936982 Glycine max
Glyma.05G112600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 29924762-29929761 Glycine max
Glyma.05G112600 5.0kb downstream 5.0kb downstream 12221 true Chr05: 29929762-29941982 Glycine max
Glyma.05G112600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 29936983-29941982 Glycine max
Glyma.05G112600 10.0kb upstream 10.0kb upstream 17221 true Chr05: 29919762-29936982 Glycine max
Glyma.05G112600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 29919762-29929761 Glycine max
Glyma.05G112600 10.0kb downstream 10.0kb downstream 17221 true Chr05: 29929762-29946982 Glycine max
Glyma.05G112600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 29936983-29946982 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303874 5265 Fabidae View MSA
124064892 5270 Rosid View MSA
123750786 5271 Pentapetalae View MSA
122796031 5272 Eudicot View MSA
122045925 5273 Angiosperm View MSA
121349684 5274 Embryophyte View MSA
123427372 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.33917 0.0 14.4844   Low
cufflinks 6.08677 0.0 16.415    
cufflinks 5.84458 0.0 15.772   Low
cufflinks 8.43591 0.0 22.5209    
cufflinks 7.3981 0.0 19.8019    
cufflinks 8.55449 0.0 22.835   High
cufflinks 8.02939 0.0 21.4611    
cufflinks 8.26287 0.0 22.0685    
cufflinks 7.22322 0.0 19.3491    
cufflinks 3.445        
cufflinks 4.856       High
cufflinks 3.646        
cufflinks 3.534        
cufflinks 3.888        
cufflinks 3.556        
cufflinks 3.477        
cufflinks 2.004       Low
cufflinks 4.749       High
cufflinks 3.666        
cufflinks 3.724        
cufflinks 4.346        
cufflinks 3.676        
cufflinks 2.716       Low
cufflinks 5.818       High
cufflinks 3.418        
cufflinks 3.57        

0 Strain