Gene : Glyma.05G113000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31989:SF51 - F5D14.30 PROTEIN-RELATED Genomic Order:  1130
Name:  ? Glyma.05G113000 Secondary Identifier:  ? PAC:30523773
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G113000 0.5kb upstream 0.5kb upstream 3282 true Chr05: 29996339-29999620 Glycine max
Glyma.05G113000 0.5kb upstream 0.5kb upstream 500 false Chr05: 29999121-29999620 Glycine max
Glyma.05G113000 0.5kb downstream 0.5kb downstream 3282 true Chr05: 29995839-29999120 Glycine max
Glyma.05G113000 0.5kb downstream 0.5kb downstream 500 false Chr05: 29995839-29996338 Glycine max
Glyma.05G113000 1.0kb upstream 1.0kb upstream 3782 true Chr05: 29996339-30000120 Glycine max
Glyma.05G113000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 29999121-30000120 Glycine max
Glyma.05G113000 1.0kb downstream 1.0kb downstream 3782 true Chr05: 29995339-29999120 Glycine max
Glyma.05G113000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 29995339-29996338 Glycine max
Glyma.05G113000 2.0kb upstream 2.0kb upstream 4782 true Chr05: 29996339-30001120 Glycine max
Glyma.05G113000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 29999121-30001120 Glycine max
Glyma.05G113000 2.0kb downstream 2.0kb downstream 4782 true Chr05: 29994339-29999120 Glycine max
Glyma.05G113000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 29994339-29996338 Glycine max
Glyma.05G113000 5.0kb upstream 5.0kb upstream 7782 true Chr05: 29996339-30004120 Glycine max
Glyma.05G113000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 29999121-30004120 Glycine max
Glyma.05G113000 5.0kb downstream 5.0kb downstream 7782 true Chr05: 29991339-29999120 Glycine max
Glyma.05G113000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 29991339-29996338 Glycine max
Glyma.05G113000 10.0kb upstream 10.0kb upstream 12782 true Chr05: 29996339-30009120 Glycine max
Glyma.05G113000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 29999121-30009120 Glycine max
Glyma.05G113000 10.0kb downstream 10.0kb downstream 12782 true Chr05: 29986339-29999120 Glycine max
Glyma.05G113000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 29986339-29996338 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311205 5265 Fabidae View MSA
124063603 5270 Rosid View MSA
123753355 5271 Pentapetalae View MSA
122797864 5272 Eudicot View MSA
122051475 5273 Angiosperm View MSA
121312510 5274 Embryophyte View MSA
123349677 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.00218 0.0 6.51927   High
cufflinks 0.207155 0.0 0.794341 Low  
cufflinks 0.177552 0.0 0.684554 Low  
cufflinks 0.3937 0.0 1.46573    
cufflinks 0.465855 0.0 1.72162    
cufflinks 0.0834213 0.0 0.331309 Low Low
cufflinks 0.67293 0.0 2.43444    
cufflinks 2.03831 0.0 6.60671   High
cufflinks 1.01927 0.0 3.57381    
cufflinks 0.108        
cufflinks 0.862       High
cufflinks 0.146        
cufflinks 0.041     Low Low
cufflinks 0.157        
cufflinks 0.134        
cufflinks 0.164        
cufflinks 0.819       High
cufflinks 0.264        
cufflinks 0.147        
cufflinks 0.153        
cufflinks 0.205        
cufflinks 0.137        
cufflinks 0.152        
cufflinks 1.278       High
cufflinks 0.119        
cufflinks 0.571       High

0 Strain